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Query: NC_005363:2588852 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2588852, End: 2607883, Length: 19032

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014910:2779573*2779573280354723975Alicycliphilus denitrificans BC chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_008702:815264*81526484609430831Azoarcus sp. BH72, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004463:76834267683426770287319448Bradyrhizobium japonicum USDA 110, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008369:51499551499553466619672Francisella tularensis subsp. holarctica OSU18, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007880:50840750840753094422538Francisella tularensis subsp. holarctica, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015675:2247960*2247960227609928140Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007798:213069*21306923654123473Neorickettsia sennetsu str. Miyayama, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015160:2521849*2521849254059918751Odoribacter splanchnicus DSM 20712 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015160:1467445*1467445149520027756Odoribacter splanchnicus DSM 20712 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009379:1910891*1910891193436123471Polynucleobacter sp. QLW-P1DMWA-1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008435:1131242*1131242118022248981Rhodopseudomonas palustris BisA53, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007958:4371125*4371125441443443310Rhodopseudomonas palustris BisB5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007940:266000*26600028816822169Rickettsia bellii RML369-C, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015437:16419416419418725523062Selenomonas sputigena ATCC 35185 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015436:1758257*1758257178406425808Spirochaeta coccoides DSM 17374 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015152:2528399*2528399254787419476Spirochaeta sp. Buddy chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010741:74535774535776827622920Treponema pallidum subsp. pallidum SS14, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_000919:74687574687576682819954Treponema pallidum subsp. pallidum str. Nichols, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015714:741044*74104476557024527Treponema paraluiscuniculi Cuniculi A chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg