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Query: NC_005140:660305:679027 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 679027, End: 680355, Length: 1329

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:638355:6570056570056583331329Vibrio vulnificus MO6-24/O chromosome II, complete sequenceprotein TadG, associated with Flp pilus assembly0917
NC_004460:81687:1004551004551017351281Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadG0889
NC_004605:741000:7601337601337615331401Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein4e-114411
NC_006155:3992818:4013489401348940150451557Yersinia pseudotuberculosis IP 32953, complete genomeputative membrane protein.6e-0755.8
NC_009381:522731:5278305278305293711542Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-0755.5
NC_010159:259695:2752302752302767861557Yersinia pestis Angola, complete genomehypothetical protein1e-0655.1
NC_004088:3859173:3874708387470838762641557Yersinia pestis KIM, complete genomehypothetical protein1e-0655.1
NC_008149:650706:6558056558056573611557Yersinia pestis Nepal516, complete genomemembrane protein1e-0655.1
NC_003143:741169:7462687462687478241557Yersinia pestis CO92, complete genomehypothetical protein1e-0655.1
NC_005810:3333000:3338210333821033397661557Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-0655.1
NC_008150:3430000:3445590344559034471461557Yersinia pestis Antiqua, complete genomehypothetical protein1e-0655.1
NC_014029:792719:7978127978127993681557Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-0655.1
NC_017160:737000:7421537421537437091557Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-0655.1
NC_017168:341233:3574783574783590341557Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-0655.1
NC_017265:3724500:3740068374006837416241557Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative fimbrial anchor1e-0655.1
NC_010634:3905369:3924946392494639265021557Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0653.9
NC_009708:692508:6976616976616992171557Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0653.9