Pre_GI: BLASTP Hits

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Query: NC_005140:660305:678429 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 678429, End: 679073, Length: 645

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:81687:9987299872100453582Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein2e-110398
NC_014966:638355:656497656497657051555Vibrio vulnificus MO6-24/O chromosome II, complete sequenceflp pilus assembly surface protein TadF, ATP/GTP-binding motif protein4e-101367
NC_004605:741000:759553759553760146594Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein2e-48192
NC_012913:167034:173086173086173688603Aggregatibacter aphrophilus NJ8700, complete genomeTadF7e-0753.9