Pre_GI: BLASTP Hits

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Query: NC_005140:660305:675045 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 675045, End: 675962, Length: 918

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:81687:964289642897342915Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadB5e-177620
NC_014966:638355:653023653023653940918Vibrio vulnificus MO6-24/O chromosome II, complete sequenceFlp pilus assembly protein TadB2e-172605
NC_004605:741000:756216756216757085870Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadB2e-104379
NC_012913:167034:175954175954176838885Aggregatibacter aphrophilus NJ8700, complete genomeTadB9e-43174
NC_013416:668152:680335680335681222888Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadB1e-42173
NC_016513:974402:986595986595987260666Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadB2e-42172
NC_002940:1065246:106436210643621065249888Haemophilus ducreyi 35000HP, complete genometight adherence protein B8e-40164
NC_013716:4306695:437223843722384373140903Citrobacter rodentium ICC168, complete genomeputative tight adherence protein B2e-35149
NC_008800:3955284:396767339676733968515843Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein2e-32139
NC_015224:3820338:384611838461183846789672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type II secretion system protein F domain protein4e-31135
NC_010465:733916:742221742221743096876Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein2e-27123
NC_010634:3905369:392144039214403922315876Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein3e-26119
NC_010159:259695:271720271720272595876Yersinia pestis Angola, complete genometype II secretion system protein F domain protein3e-26119
NC_005810:3333000:334240133424013343276876Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-26119
NC_008149:650706:659997659997660872876Yersinia pestis Nepal516, complete genomemembrane protein3e-26119
NC_008150:3430000:344208034420803442955876Yersinia pestis Antiqua, complete genomehypothetical protein3e-26119
NC_003143:741169:750459750459751334876Yersinia pestis CO92, complete genomehypothetical protein3e-26119
NC_006155:3992818:400997940099794010854876Yersinia pseudotuberculosis IP 32953, complete genomeputative integral membrane protein.3e-26119
NC_009381:522731:532020532020532895876Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-26119
NC_009708:692508:701852701852702727876Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein F domain2e-26119
NC_017265:3724500:373655837365583737433876Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flp pilus assembly protein TadB3e-26119
NC_017168:341233:353968353968354843876Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-26119
NC_017160:737000:746344746344747219876Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-26119
NC_017154:734875:744166744166745041876Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-26119
NC_014029:792719:802003802003802878876Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-26119
NC_004088:3859173:387126138712613872073813Yersinia pestis KIM, complete genomehypothetical protein4e-26118
NC_008609:2933468:293953529395352940500966Pelobacter propionicus DSM 2379, complete genometype II secretion system protein1e-1480.9
NC_011894:3885490:390713739071373908120984Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein2e-1479.7
NC_008541:3282415:329572832957283296678951Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein2e-1377
NC_011027:1570955:160219716021971603165969Chlorobaculum parvum NCIB 8327, complete genometype II secretion system protein1e-1377
NC_010338:4530403:455321545532154554192978Caulobacter sp. K31, complete genometype II secretion system protein5e-1375.1
NC_011894:2618951:265750026575002658444945Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein6e-1375.1
NC_007794:1553000:156780915678091568795987Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein2e-1273.6
NC_021171:4549673:456131845613184562301984Bacillus sp. 1NLA3E, complete genometype II secretion system F domain-containing protein2e-1273.6
NC_007498:2046935:205091920509192051896978Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadB4e-1272
NC_016613:2759908:277448427744842775452969Vibrio sp. EJY3 chromosome 1, complete sequencetight adherence TadB-like transmembrane protein6e-1271.6
NC_008541:3282415:330340633034063304338933Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein8e-1271.2
NC_010334:2749250:275746327574632758440978Shewanella halifaxensis HAW-EB4, complete genometype II secretion system protein2e-1170.1
NC_008786:266959:271026271026271898873Verminephrobacter eiseniae EF01-2, complete genometype II secretion system protein3e-1169.3
NC_009901:2427291:244584524458452446822978Shewanella pealeana ATCC 700345, complete genometype II secretion system protein3e-1169.3
NC_002932:440191:455327455327456244918Chlorobium tepidum TLS, complete genomeTadB protein5e-1168.6
NC_015588:95697:108643108643109572930Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein9e-1167.8
NC_011886:2950411:297252029725202973470951Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein1e-1067.4
NC_011769:3434744:346271734627173463682966Desulfovibrio vulgaris str. 'Miyazaki F', complete genometype II secretion system protein2e-1067
NC_016002:2453919:249578124957812496755975Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein3e-1066.2
NC_007614:2675302:267990926799092680880972Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II secretion system protein5e-1065.1
NC_011886:2950411:297992329799232980855933Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-0962.8
NC_018867:361423:380079380079381026948Dehalobacter sp. CF chromosome, complete genomeFlp pilus assembly protein TadB4e-0858.9
NC_006512:952894:956909956909957610702Idiomarina loihiensis L2TR, complete genomeFlp pilus assembly protein TadB1e-0757.8
NC_004463:3857763:3865865386586538668811017Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein9e-0857.8
NC_008536:5259438:527572152757215276686966Solibacter usitatus Ellin6076, complete genometype II secretion system protein1e-0757.4
NC_013223:1349000:136491413649141365885972Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein4e-0755.8
NC_014152:397177:399681399681400622942Thermincola sp. JR, complete genomeType II secretion system F domain protein4e-0755.8
NC_014830:532122:5450575450575470151959Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain6e-0755.1
NC_012778:2049694:204899420489942049701708Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0653.1
NC_010501:908000:934781934781935662882Pseudomonas putida W619, complete genometype II secretion system protein6e-0652