Pre_GI: BLASTP Hits

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Query: NC_005139:2731623:2733981 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2733981, End: 2734394, Length: 414

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014965:670115:686986686986687399414Vibrio vulnificus MO6-24/O chromosome I, complete sequenceMarR family transcriptional regulator1e-75281
NC_004459:1679335:169616416961641696577414Vibrio vulnificus CMCP6 chromosome I, complete sequenceTranscriptional regulator1e-75281
NC_013595:4796436:482363748236374824152516Streptosporangium roseum DSM 43021, complete genomehypothetical protein9e-0958.9
NC_016628:763833:791320791320791802483Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, MarR family protein2e-0754.3
NC_016745:123772:145693145693146214522Oceanimonas sp. GK1 chromosome, complete genomeMarR family transcriptional regulator3e-0753.9
NC_013526:439813:475491475491476015525Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, TrmB9e-0752.4
NC_011832:1283521:129336212933621293802441Candidatus Methanosphaerula palustris E1-9c, complete genometranscriptional regulator, MarR family2e-0651.6
NC_014328:4546390:456014745601474560623477Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative MarR family transcriptional regulator3e-0650.4
NC_014837:1873020:187837618783761878813438Pantoea sp. At-9b chromosome, complete genomeMarR family transcriptional regulator1e-0548.9