Pre_GI: BLASTP Hits

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Query: NC_004631:4381724:4399757 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4399757, End: 4400314, Length: 558

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:441510744151074415664558Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-104376
NC_016832:4368948:438711643871164387538423Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-77288
NC_012125:4481808:450237945023794502801423Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-77286
NC_016845:4539381:455388445538844554468585Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-53208
NC_009832:4564752:456639445663944567023630Serratia proteamaculans 568, complete genomehypothetical protein2e-52205
NC_009832:358291:360736360736361365630Serratia proteamaculans 568, complete genomehypothetical protein9e-52202
NC_014029:331919:350008350008350637630Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-51201
NC_015567:313035:315456315456316130675Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-51201
NC_012779:305969:325647325647326255609Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-49194
NC_014228:3505320:351617835161783516759582Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-48189
NC_013892:3278647:328876032887603289341582Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-48189
NC_013892:1503162:150793615079361508517582Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-48189
NC_014228:3391500:341144434114443412025582Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-47188
NC_009708:4215500:421728542172854217866582Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-47188
NC_004547:590844:596187596187596801615Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-47187
NC_014121:398012:421438421438422037600Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-43175
NC_010102:4477836:449802744980274498623597Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-43175
NC_016816:4232680:423268042326804233222543Pantoea ananatis LMG 5342, complete genomehypothetical protein3e-40164
NC_010554:2872000:288050028805002881090591Proteus mirabilis HI4320, complete genomehypothetical protein6e-39160
NC_020181:3328844:333166433316643332203540Enterobacter aerogenes EA1509E, complete genomeFIG004780: hypothetical protein in PFGI-1-like cluster1e-37155
NC_013716:3512950:355274035527403553279540Citrobacter rodentium ICC168, complete genomehypothetical protein2e-37154
NC_012731:600518:625384625384625941558Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-34143
NC_009648:5119271:513903651390365139593558Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-33142
NC_012913:1041969:104499810449981045555558Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein4e-28124
NC_003143:2137945:213794521379452138526582Yersinia pestis CO92, complete genomehypothetical protein3e-28124
NC_004088:2640440:267827226782722678853582Yersinia pestis KIM, complete genomehypothetical protein3e-28124
NC_010159:2164500:216465621646562165237582Yersinia pestis Angola, complete genomehypothetical protein3e-28124
NC_008150:1420825:142102414210241421605582Yersinia pestis Antiqua, complete genomehypothetical protein3e-28124
NC_005810:1794490:179468917946891795270582Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-28124
NC_009381:1362471:139767313976731398254582Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-28124
NC_012731:3411161:342859534285953429176582Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-28124
NC_016845:3448881:346631434663143466895582Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-28124
NC_017154:2137500:213751321375132138094582Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-28124
NC_017160:2362002:239980823998082400389582Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-28124
NC_011283:1811000:185250318525031853090588Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-28124
NC_017047:2079368:208394720839472084534588Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-27122
NC_012912:1701231:171465217146521715236585Dickeya zeae Ech1591, complete genomehypothetical protein7e-27120
NC_004547:1873390:188041718804171881001585Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-27120
NC_010519:1963256:198988219898821990439558Haemophilus somnus 2336 chromosome, complete genomehypothetical protein6e-27120
NC_016818:1795576:183453318345331835120588Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein5e-27120
NC_014500:3097362:314314331431433143727585Dickeya dadantii 3937 chromosome, complete genomehypothetical protein3e-27120
NC_013421:1819036:184106618410661841650585Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-26119
NC_014532:3555550:355746035574603558107648Halomonas elongata DSM 2581, complete genomehypothetical protein4e-26117
NC_016830:3869572:393768439376843938232549Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-25115
NC_013592:2968500:299395829939582994542585Dickeya dadantii Ech586, complete genomehypothetical protein3e-24111
NC_012660:2143376:214869721486972149245549Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-24109
NC_006155:1916426:191642619164261916926501Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein9e-24109
NC_010634:1916000:191641019164101916910501Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein9e-24109
NC_009512:3282500:330516533051653305716552Pseudomonas putida F1, complete genomehypothetical protein2e-23108
NC_015733:2658337:266060526606052661156552Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-22105
NC_010170:1498253:149825314982531498813561Bordetella petrii, complete genomehypothetical protein6e-22103
NC_009138:1974935:198693119869311987491561Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-21102
NC_009656:4527457:458772345877234588478756Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-21101
NC_018080:5091772:510884651088465109613768Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-21100
NC_008344:49039:118231118231118791561Nitrosomonas eutropha C91, complete genomehypothetical protein9e-2199.8
NC_008463:5246954:526216152621615262928768Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-2098.6
NC_002488:1638946:170009517000951700655561Xylella fastidiosa 9a5c, complete genomehypothetical protein4e-2097.8
NC_008782:1510000:151123815112381511798561Acidovorax sp. JS42, complete genomehypothetical protein1e-1995.9
NC_004129:5373886:538786253878625388488627Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-1995.5
NC_007086:2477040:248268324826832483243561Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-1995.1
NC_010688:2781624:280253628025362803096561Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-1995.1
NC_013421:1780722:180212718021271802690564Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-1789.7
NC_015379:2417312:246117124611712461731561Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-1685.5
NC_012691:2614603:262581426258142626374561Tolumonas auensis DSM 9187, complete genomehypothetical protein4e-1580.9
NC_007005:1705406:171659317165931717330738Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-1478.2
NC_010170:1324758:135521813552181355778561Bordetella petrii, complete genomehypothetical protein3e-1478.2
NC_008739:41793:462414624146846606Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein3e-0858.2
NC_015554:4648919:466697846669784667514537Alteromonas sp. SN2 chromosome, complete genomehypothetical protein8e-0856.6
NC_007484:667879:667879667879668481603Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein9e-0856.6