Pre_GI: BLASTP Hits

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Query: NC_004631:4381724:4394302 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4394302, End: 4395336, Length: 1035

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:4409652440965244106861035Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0707
NC_016832:4368948:438161043816104382560951Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Chromosome partitioning protein0649
NC_012125:4481808:449687344968734497823951Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0649
NC_004547:590844:590844590844591731888Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-123443
NC_010554:2872000:288535228853522886224873Proteus mirabilis HI4320, complete genomechromosome partitioning related protein3e-110398
NC_009832:4564752:457084745708474571773927Serratia proteamaculans 568, complete genomehypothetical protein3e-109395
NC_014029:331919:345342345342346205864Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-106384
NC_014228:3505320:351187835118783512765888Xenorhabdus nematophila ATCC 19061, complete genomeputative Protein-tyrosine kinase7e-105380
NC_014228:3391500:340714334071433408030888Xenorhabdus nematophila ATCC 19061, complete genomeputative chromosome partitioning related protein SOJ-like protein7e-105380
NC_013892:1503162:151191215119121512799888Xenorhabdus bovienii SS-2004 chromosome, complete genomechromosome partitioning-like protein2e-104379
NC_013892:3278647:328447732844773285364888Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-103376
NC_009708:4215500:422089242208924221773882Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-100364
NC_016845:4539381:455783045578304558702873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,chromosome partitioning ATPase2e-99362
NC_009801:3374501:339642433964243397308885Escherichia coli E24377A, complete genomechromosome partitioning protein homolog2e-96352
NC_014121:398012:416426416426417310885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-94344
NC_016816:4232680:423741042374104238297888Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-93342
NC_012779:305969:319470319470320342873Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-92340
NC_010102:4477836:449296944929694493883915Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-91335
NC_007005:1705406:172317317231731724033861Pseudomonas syringae pv. syringae B728a, complete genomechromosome partitioning related protein2e-52206
NC_018080:5091772:509785950978595098752894Pseudomonas aeruginosa DK2 chromosome, complete genomechromosome partitioning-like protein7e-51201
NC_008463:5246954:525158052515805252446867Pseudomonas aeruginosa UCBPP-PA14, complete genomechromosome partitioning related protein3e-50199
NC_009656:4527457:457389545738954574755861Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-49196
NC_012691:2614603:262296626229662623829864Tolumonas auensis DSM 9187, complete genomeCobyrinic acid ac-diamide synthase4e-46185
NC_008344:49039:120705120705121565861Nitrosomonas eutropha C91, complete genomeCobyrinic acid a,c-diamide synthase4e-45182
NC_008782:1510000:151369415136941514569876Acidovorax sp. JS42, complete genomeCobyrinic acid a,c-diamide synthase3e-43176
NC_010170:1324758:135238513523851353248864Bordetella petrii, complete genomehypothetical protein1e-42174
NC_013716:3512950:355645335564533557337885Citrobacter rodentium ICC168, complete genomeputative partitioning protein A1e-42173
NC_009512:3282500:330271733027173303595879Pseudomonas putida F1, complete genomeCobyrinic acid a,c-diamide synthase2e-42173
NC_010688:2781624:279976527997652800640876Xanthomonas campestris pv. campestris, complete genomechromosome partitioning related protein2e-42173
NC_009138:1974935:198413919841391985014876Herminiimonas arsenicoxydans, complete genomePutative chromosome partitioning related protein3e-42172
NC_007086:2477040:248513924851392486014876Xanthomonas campestris pv. campestris str. 8004, complete genomechromosome partitioning related protein1e-41170
NC_012660:2143376:215113821511382151980843Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chromosome partitioning-like protein2e-40166
NC_013421:1780722:180466318046631805526864Pectobacterium wasabiae WPP163, complete genomeCobyrinic acid ac-diamide synthase5e-40165
NC_015733:2658337:266283626628362663723888Pseudomonas putida S16 chromosome, complete genomecobyrinic acid a,c-diamide synthase2e-39162
NC_016513:1126263:114148011414801142256777Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeParA-DnaB1e-34147
NC_011035:829945:836087836087836974888Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein ParA1e-29130
NC_008789:707916:720419720419721240822Halorhodospira halophila SL1, complete genomeCobyrinic acid a,c-diamide synthase3e-29129
NC_010170:4463000:446524744652474465990744Bordetella petrii, complete genomehypothetical protein2e-28127
NC_016616:2768053:277375027737502774658909Dechlorosoma suillum PS chromosome, complete genomechromosome partitioning ATPase5e-25115
NC_010939:1986263:200253720025372003046510Actinobacillus pleuropneumoniae serovar 7 str. AP76, completechromosome partitioning ATPase7e-23108
NC_008752:2936933:294328929432892944173885Acidovorax avenae subsp. citrulli AAC00-1, complete genomeCobyrinic acid a,c-diamide synthase2e-1996.7
NC_015275:911999:921658921658922443786Clostridium lentocellum DSM 5427 chromosome, complete genomeCobyrinic acid ac-diamide synthase1e-0963.9
NC_008532:973510:991371991371992111741Streptococcus thermophilus LMD-9, complete genomeTyrosine-protein kinase (capsular polysaccharide biosynthesis)1e-0860.8
NC_011026:2533017:2542142254214225445322391Chloroherpeton thalassium ATCC 35110, complete genomecapsular exopolysaccharide family7e-0858.5
NC_016027:2047954:210607021060702106891822Gluconacetobacter xylinus NBRC 3288, complete genomechromosome partitioning protein ParA/MRP/soj3e-0756.6
NC_011026:3009500:3027576302757630299722397Chloroherpeton thalassium ATCC 35110, complete genomecapsular exopolysaccharide family3e-0756.6
NC_012108:2874831:2917503291750329196862184Desulfobacterium autotrophicum HRM2, complete genomeGumC22e-0756.6
NC_014169:1442435:144243514424351443274840Bifidobacterium longum subsp. longum JDM301 chromosome, completecobyrinic acid a,c-diamide synthase2e-0756.6
NC_010999:2155714:217165121716512172409759Lactobacillus casei, complete genomeWze6e-0755.5
NC_013729:5497814:5518180551818055192471068Kribbella flavida DSM 17836, complete genomeCobyrinic acid ac-diamide synthase6e-0755.1
NC_006448:957830:978630978630979370741Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide exporter accessory protein7e-0755.1
NC_012914:469117:473754473754474446693Paenibacillus sp. JDR-2, complete genomecapsular exopolysaccharide family1e-0654.3
NC_019892:3086493:3087255308725530894772223Singulisphaera acidiphila DSM 18658 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein1e-0654.3
NC_005296:3783348:3795678379567837980262349Rhodopseudomonas palustris CGA009, complete genomeputative exopolysaccharide polymerization protein2e-0653.5
NC_011004:4045277:4057608405760840599562349Rhodopseudomonas palustris TIE-1, complete genomecapsular exopolysaccharide family2e-0653.5
NC_019892:6801246:6814959681495968171842226Singulisphaera acidiphila DSM 18658 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein4e-0652.8
NC_012988:2455807:2499521249952125006751155Methylobacterium extorquens DM4, complete genomereplication protein A4e-0652.4
NC_015573:2063925:208658820865882087295708Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomecapsular exopolysaccharide family7e-0651.6
NC_014727:1877764:190271619027161903492777Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,tyrosine-protein kinase9e-0651.6