Pre_GI: BLASTP Hits

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Query: NC_004631:4381724:4389719 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4389719, End: 4390006, Length: 288

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:4513106:452103445210344521321288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein3e-48190
NC_016857:4573173:458117945811794581466288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GerE family regulatory protein3e-48190
NC_016856:4563435:457342845734284573715288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein3e-48190
NC_016810:4573172:458117845811784581465288Salmonella enterica subsp. enterica serovar Typhimurium strputative GerE family regulatory protein3e-48190
NC_003198:4397074:440506944050694405356288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative GerE family regulatory protein3e-48190
NC_003197:4551880:456059845605984560885288Salmonella typhimurium LT2, complete genomeputative regulatory protein3e-48190
NC_006905:4486433:449455644945564494843288Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory proteins, luxR family9e-48188
NC_011294:4409137:441741844174184417705288Salmonella enterica subsp. enterica serovar Enteritidis strGerE family regulatory protein9e-48188
NC_011274:4385039:439532243953224395609288Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GerE family regulatory protein1e-46184
NC_015761:4188250:420458442045844204871288Salmonella bongori NCTC 12419, complete genomeGerE family regulatory protein2e-45180
NC_011149:4474012:448204044820404482312273Salmonella enterica subsp. enterica serovar Agona str. SL483,putative GerE family regulatory protein2e-45180
NC_011083:4547825:455582145558214556093273Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GerE family regulatory protein2e-45180
NC_011080:4543000:455103245510324551304273Salmonella enterica subsp. enterica serovar Newport str. SL254,putative GerE family regulatory protein2e-45180
NC_011094:4442478:445050844505084450780273Salmonella enterica subsp. enterica serovar Schwarzengrund strGerE family regulatory protein2e-45180
NC_011205:4564645:457463845746384574910273Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853GerE family regulatory protein2e-45180
NC_016832:4368948:437694343769434377215273Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator, LuxR2e-45180
NC_016860:4649274:465799246579924658264273Salmonella enterica subsp. enterica serovar Typhimurium strputative GerE-family regulatory protein2e-45180
NC_010102:4477836:448611944861194486391273Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-45179
NC_011147:4297513:430755743075574307829273Salmonella enterica subsp. enterica serovar Paratyphi A strGerE family regulatory protein9e-45178
NC_012125:4481808:448993144899314490203273Salmonella enterica subsp. enterica serovar Paratyphi C strainGerE family regulatory protein2e-44177
NC_010067:3204682:322097332209733221245273Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-39160
NC_020829:1307736:131243713124371313066630Pseudomonas denitrificans ATCC 13867, complete genometwo component response regulator8e-0648.9