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Query: NC_004631:4381724:4386232 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4386232, End: 4387632, Length: 1401

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4368948:4373456437345643748561401Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0980
NC_003198:4397074:4401582440158244029821401Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0980
NC_011147:4297513:4304069430406943054691401Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein0973
NC_003197:4551880:4556468455646845578681401Salmonella typhimurium LT2, complete genomehypothetical protein0964
NC_016810:4573172:4577760457776045791601401Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0964
NC_016856:4563435:4570010457001045714101401Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0964
NC_016857:4573173:4577761457776145791611401Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein0964
NC_016860:4649274:4653862465386246552621401Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0964
NC_016863:4513106:4517616451761645190161401Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein0964
NC_011149:4474012:4478600447860044800001401Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein0964
NC_010102:4477836:4482424448242444838241401Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0963
NC_017046:4571833:4576421457642145778211401Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0963
NC_011094:4442478:4447066444706644484661401Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0963
NC_016831:4367000:4371778437177843731781401Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0962
NC_011294:4409137:4413724441372444151241401Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0962
NC_011274:4385039:4391632439163243930321401Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0962
NC_011205:4564645:4571220457122045726201401Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0962
NC_006905:4486433:4491021449102144924211401Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic or exported protein0961
NC_012125:4481808:4486396448639644877961401Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0961
NC_011080:4543000:4547587454758745489871401Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein0959
NC_011083:4547825:4552413455241345536601248Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0858
NC_011083:4547825:455365045536504553775126Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-1583.2
NC_013166:32474:7958279582809941413Kangiella koreensis DSM 16069, complete genomehypothetical protein2e-1170.9