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Query: NC_004578:5192110:5210079 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5210079, End: 5210681, Length: 603

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:166952416695241670126603Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-112404
NC_012660:2045398:207358720735872074195609Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-85314
NC_016816:4129299:416190441619044162557654Pantoea ananatis LMG 5342, complete genomeuracil-DNA glycosylase superfamily protein3e-32138
NC_014304:77715:963449634496943600Erwinia billingiae Eb661 plasmid pEB102, complete sequenceUracil-DNA glycosylase family protein9e-32136
NC_008639:2545107:256268725626872563667981Chlorobium phaeobacteroides DSM 266, complete genomeUracil-DNA glycosylase superfamily2e-1789.4
NC_009429:622359:651593651593652267675Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein9e-1786.7
NC_009049:1934398:195879319587931959464672Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceUracil-DNA glycosylase superfamily1e-1686.3