Pre_GI: BLASTP Hits

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Query: NC_004578:4869673:4872780 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4872780, End: 4873772, Length: 993

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:1333863:1347371134737113490261656Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-132470
NC_004578:4061372:4069104406910440707831680Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-102372
NC_008740:1357312:1370675137067513723211647Marinobacter aquaeolei VT8, complete genomehypothetical protein6e-41168
NC_020209:47504:1016341016341028391206Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-31135
NC_016616:1182125:1197990119799011996601671Dechlorosoma suillum PS chromosome, complete genomephage integrase family protein9e-25114
NC_010087:376918:422266422266423240975Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein6e-22105
NC_009254:745706:779495779495780256762Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein3e-1272.8