Pre_GI: BLASTN Hits

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Query: NC_004557:2037500 Clostridium tetani E88, complete genome

Start: 2037500, End: 2057599, Length: 20100

Host Lineage: Clostridium tetani; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a virulent nonsporulating variant of strain Massachusetts used in vaccine production. Causes tetanus. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism causes tetanus (lockjaw) in humans. At the tissue level, the bacterium then releases an exotoxin called tetanospasmin that causes certain nervous system irregularities by means of retrograde tramsmission through neurons to the brain. If nervous impulses cannot be checked by normal inhibitory mechanisms, it produces the generalized muscular spasms characteristic of tetanus.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014328:2990790*2990790303209941310Clostridium ljungdahlii ATCC 49587 chromosome, complete genome02559BLASTN svgBLASTP svg
NC_009089:41771174177117420070723591Clostridium difficile 630, complete genome9e-114418BLASTN svgBLASTP svg
NC_010418:13832513832516678028456Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete3e-49204BLASTN svgBLASTP svg
NC_010379:688068804619239313Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence3e-49204BLASTN svgBLASTP svg
NC_014393:10228431022843104706224220Clostridium cellulovorans 743B chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_018867:1407163*1407163145586448702Dehalobacter sp. CF chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014393:503230*50323052309919870Clostridium cellulovorans 743B chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014393:139690*13969016309923410Clostridium cellulovorans 743B chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007168:19237231923723194369919977Staphylococcus haemolyticus JCSC1435, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014393:93700093700097266735668Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011898:3367457*3367457341359946143Clostridium cellulolyticum H10, complete genome9e-0660BLASTN svgBLASTP svg
NC_003909:386880*38688041453927660Bacillus cereus ATCC 10987, complete genome9e-0660BLASTN svgBLASTP svg