Query: NC_004557:1826977 Clostridium tetani E88, complete genome
Start: 1826977, End: 1845658, Length: 18682
Host Lineage: Clostridium tetani; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: This strain is a virulent nonsporulating variant of strain Massachusetts used in vaccine production. Causes tetanus. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism causes tetanus (lockjaw) in humans. At the tissue level, the bacterium then releases an exotoxin called tetanospasmin that causes certain nervous system irregularities by means of retrograde tramsmission through neurons to the brain. If nervous impulses cannot be checked by normal inhibitory mechanisms, it produces the generalized muscular spasms characteristic of tetanus.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012563:3090954 | 3090954 | 3120522 | 29569 | Clostridium botulinum A2 str. Kyoto, complete genome | 7e-99 | 369 | BLASTN svg | BLASTP svg |
NC_010520:2937981 | 2937981 | 2965935 | 27955 | Clostridium botulinum A3 str. Loch Maree, complete genome | 3e-95 | 357 | BLASTN svg | BLASTP svg |
NC_008593:1060548 | 1060548 | 1085602 | 25055 | Clostridium novyi NT, complete genome | 4e-94 | 353 | BLASTN svg | BLASTP svg |
NC_010516:2900057 | 2900057 | 2925579 | 25523 | Clostridium botulinum B1 str. Okra, complete genome | 4e-91 | 343 | BLASTN svg | BLASTP svg |
NC_021182:2921000 | 2921000 | 2955373 | 34374 | Clostridium pasteurianum BC1, complete genome | 1e-78 | 301 | BLASTN svg | BLASTP svg |
NC_014328:1046958 | 1046958 | 1068763 | 21806 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 2e-68 | 268 | BLASTN svg | BLASTP svg |
NC_010723:801215 | 801215 | 825129 | 23915 | Clostridium botulinum E3 str. Alaska E43, complete genome | 7e-62 | 246 | BLASTN svg | BLASTP svg |
NC_020291:4944835 | 4944835 | 5007599 | 62765 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_010674:828191 | 828191 | 847202 | 19012 | Clostridium botulinum B str. Eklund 17B, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_018664:239000 | 239000 | 264099 | 25100 | Clostridium acidurici 9a chromosome, complete genome | 2e-37 | 165 | BLASTN svg | BLASTP svg |
NC_015913:624859 | 624859 | 643650 | 18792 | Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_009922:2721343* | 2721343 | 2763935 | 42593 | Alkaliphilus oremlandii OhILAs, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_016012:561687 | 561687 | 581099 | 19413 | Candidatus Arthromitus sp. SFB-rat-Yit, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_018664:1663324 | 1663324 | 1685669 | 22346 | Clostridium acidurici 9a chromosome, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_015391:2059191* | 2059191 | 2098961 | 39771 | Carnobacterium sp. 17-4 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014829:3877701 | 3877701 | 3899638 | 21938 | Bacillus cellulosilyticus DSM 2522 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014652:1091610 | 1091610 | 1114612 | 23003 | Caldicellulosiruptor hydrothermalis 108 chromosome, complete | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012781:3087467* | 3087467 | 3106731 | 19265 | Eubacterium rectale ATCC 33656, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015660:391627* | 391627 | 417703 | 26077 | Geobacillus thermoglucosidasius C56-YS93 chromosome, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013791:1082951* | 1082951 | 1104425 | 21475 | Bacillus pseudofirmus OF4 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015589:1240197 | 1240197 | 1271172 | 30976 | Desulfotomaculum ruminis DSM 2154 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_019897:700332* | 700332 | 751370 | 51039 | Thermobacillus composti KWC4 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012914:6583000* | 6583000 | 6614685 | 31686 | Paenibacillus sp. JDR-2, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009012:2661795* | 2661795 | 2685908 | 24114 | Clostridium thermocellum ATCC 27405, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014393:4951742 | 4951742 | 4971927 | 20186 | Clostridium cellulovorans 743B chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007503:861668 | 861668 | 884145 | 22478 | Carboxydothermus hydrogenoformans Z-2901, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_006510:3133965* | 3133965 | 3166240 | 32276 | Geobacillus kaustophilus HTA426, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |