Pre_GI: BLASTP Hits

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Query: NC_004556:1933944:1950020 Xylella fastidiosa Temecula1, complete genome

Start: 1950020, End: 1951018, Length: 999

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008752:2724977:2727883272788327289261044Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTIM-barrel protein, yjbN family3e-69262
NC_008782:3361850:3377434337743433784621029Acidovorax sp. JS42, complete genomedihydrouridine synthase, DuS8e-0755.1
NC_009922:490500:502960502960503934975Alkaliphilus oremlandii OhILAs, complete genomeputative TIM-barrel protein, nifR3 family4e-1685.9
NC_013851:949973:9557229557229567381017Allochromatium vinosum DSM 180 chromosome, complete genomeTIM-barrel protein, nifR3 family8e-1374.7
NC_011138:3881446:3882924388292438839701047Alteromonas macleodii 'Deep ecotype', complete genometRNA-dihydrouridine synthase A4e-72271
NC_018679:3843870:384788138478813848810930Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completetRNA-dihydrouridine synthase A1e-61237
NC_015554:4724245:474773247477324748730999Alteromonas sp. SN2 chromosome, complete genometRNA-dihydrouridine synthase B7e-1271.6
NC_017187:422698:427051427051427980930Arcobacter butzleri ED-1, complete genometRNA-dihydrouridine synthase2e-1067.4
NC_009850:445000:449434449434450363930Arcobacter butzleri RM4018, complete genomeprobable tRNA-dihydrouridine synthase2e-1067.4
NC_014166:681290:687958687958688908951Arcobacter nitrofigilis DSM 7299 chromosome, complete genomedihydrouridine synthase2e-1170.1
NC_015634:2445396:244539624453962446391996Bacillus coagulans 2-6 chromosome, complete genomedihydrouridine synthase DuS7e-0961.6
NC_016023:2163000:219439421943942195377984Bacillus coagulans 36D1 chromosome, complete genomedihydrouridine synthase DuS3e-0859.7
NC_009848:720510:736808736808737782975Bacillus pumilus SAFR-032, complete genometRNA-dihydrouridine synthase6e-0858.5
NC_010161:1179000:119759811975981198581984Bartonella tribocorum CIP 105476, complete genometRNA-dihydrouridine synthase A2e-73276
NC_008060:1182378:1186253118625311873501098Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceTIM-barrel protein, yjbN family6e-77287
NC_008542:1727000:1730938173093817320351098Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceTIM-barrel protein, yjbN family6e-77287
NC_010508:1705500:170956517095651710551987Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceTIM-barrel protein, yjbN family6e-73274
NC_015949:71474:912649126492250987Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTIM-barrel protein, nifR3 family5e-1788.6
NC_017028:109811:129407129407130402996Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completePutative dihydrouridine synthase Dus7e-1478.6
NC_007503:2098980:212359621235962124561966Carboxydothermus hydrogenoformans Z-2901, complete genomeputative TIM-barrel protein, NifR3 family5e-1685.5
NC_002932:1798869:1823480182348018245381059Chlorobium tepidum TLS, complete genomeTIM-barrel protein, NifR3 family6e-1168.6
NC_007963:1370903:1376142137614213771821041Chromohalobacter salexigens DSM 3043, complete genomeTIM-barrel protein, yjbN family7e-74277
NC_003030:3324834:334410733441073345072966Clostridium acetobutylicum ATCC 824, complete genomeNifR3 family enzyme2e-1686.7
NC_015687:3326461:334573333457333346698966Clostridium acetobutylicum DSM 1731 chromosome, complete genomeNifR3 family protein2e-1686.7
NC_018664:2459994:247820724782072479175969Clostridium acidurici 9a chromosome, complete genometRNA-dihydrouridine synthase B3e-1272.8
NC_009697:3711692:373974537397453740716972Clostridium botulinum A str. ATCC 19397 chromosome, completedihydrouridine synthase9e-1477.8
NC_009495:3735703:376375637637563764727972Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedihydrouridine synthase9e-1477.8
NC_009698:3609881:363685536368553637826972Clostridium botulinum A str. Hall chromosome, complete genomedihydrouridine synthase9e-1477.8
NC_012563:4004709:403168040316804032651972Clostridium botulinum A2 str. Kyoto, complete genomedihydrouridine synthase1e-1377.4
NC_010516:3807780:383476238347623835733972Clostridium botulinum B1 str. Okra, complete genomedihydrouridine synthase1e-1377.8
NC_015425:163000:172843172843173805963Clostridium botulinum BKT015925 chromosome, complete genomeputative TIM-barrel protein, nifR3 family7e-1685.1
NC_010723:173280:187823187823188788966Clostridium botulinum E3 str. Alaska E43, complete genometRNA-dihydrouridine synthase B1e-1170.9
NC_017297:3838189:386516538651653866136972Clostridium botulinum F str. 230613 chromosome, complete genomedihydrouridine synthase1e-1377.8
NC_009699:3839575:386654338665433867514972Clostridium botulinum F str. Langeland chromosome, complete genomedihydrouridine synthase1e-1377.8
NC_014393:4541000:456059345605934561558966Clostridium cellulovorans 743B chromosome, complete genomeTIM-barrel protein, nifR3 family3e-1582.8
NC_009089:4140764:415482241548224155790969Clostridium difficile 630, complete genometRNA-dihydrouridine synthase2e-1479.7
NC_013316:4018451:403314440331444034112969Clostridium difficile R20291, complete genometRNA-dihydrouridine synthase2e-1479.7
NC_014328:4471995:449344644934464494408963Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative tRNA-dihydrouridine synthase6e-1478.6
NC_008593:153014:162795162795163760966Clostridium novyi NT, complete genomenifR3 family enzyme3e-1479.7
NC_021182:4602683:462410046241004625071972Clostridium pasteurianum BC1, complete genomeputative TIM-barrel protein, nifR3 family2e-1273.6
NC_008262:2649289:268753626875362688516981Clostridium perfringens SM101, complete genomeputative dihydrouridine synthase2e-1170.5
NC_020291:117983:139857139857140822966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA-dihydrouridine synthase B2e-1583.2
NC_020134:134875:140266140266141240975Clostridium stercorarium subsp. stercorarium DSM 8532, completetRNA-dihydrouridine synthase 14e-1375.9
NC_004557:162670:167984167984168952969Clostridium tetani E88, complete genomenitrogen regulation protein nifR35e-1375.5
NC_013446:1173377:1175387117538711764301044Comamonas testosteroni CNB-2, complete genomedihydrouridine synthase, DuS8e-0755.1
NC_013446:2655955:2671163267116326721971035Comamonas testosteroni CNB-2, complete genomeTIM-barrel protein, yjbN family3e-65249
NC_017030:6912830:6935451693545169364641014Corallococcus coralloides DSM 2259 chromosome, complete genometRNA-dihydrouridine synthase A1e-76286
NC_018867:361423:363127363127364104978Dehalobacter sp. CF chromosome, complete genometRNA dihydrouridine synthase B1e-1480.9
NC_010002:5752363:576824257682425769231990Delftia acidovorans SPH-1, complete genomedihydrouridine synthase DuS1e-0654.7
NC_010002:3980832:3984761398476139857711011Delftia acidovorans SPH-1, complete genomeTIM-barrel protein, yjbN family6e-69261
NC_015563:3571682:359247535924753593452978Delftia sp. Cs1-4 chromosome, complete genomeTIM-barrel protein, yjbN family5e-67254
NC_015563:1595500:159812415981241599113990Delftia sp. Cs1-4 chromosome, complete genomedihydrouridine synthase DuS1e-0654.3
NC_019903:83857:927869278693751966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,tRNA-U20-dihydrouridine synthase1e-1687.4
NC_007907:225948:233200233200234180981Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1272.4
NC_014972:2089003:210580821058082106797990Desulfobulbus propionicus DSM 2032 chromosome, complete genometRNA-U20-dihydrouridine synthase7e-1375.1
NC_014972:3227500:3229358322935832304011044Desulfobulbus propionicus DSM 2032 chromosome, complete genomedihydrouridine synthase DuS4e-1065.9
NC_016584:85543:902889028891253966Desulfosporosinus orientis DSM 765 chromosome, complete genomeTIM-barrel protein, nifR3 family3e-1479.7
NC_015565:173774:176905176905177876972Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTIM-barrel protein, nifR3 family3e-1169.7
NC_009952:2661268:2676018267601826770341017Dinoroseobacter shibae DFL 12, complete genometRNA-dihydrouridine synthase A9e-70263
NC_020181:3585898:3624834362483436258981065Enterobacter aerogenes EA1509E, complete genometRNA dihydrouridine synthase A3e-70265
NC_013971:335247:3524143524143534631050Erwinia amylovora ATCC 49946 chromosome, complete genometRNA-dihydrouridine synthase A3e-73275
NC_013961:3413011:3417919341791934189681050Erwinia amylovora, complete genometRNA-dihydrouridine synthase A3e-73275
NC_013364:4990365:5001454500145450024911038Escherichia coli O111:H- str. 11128, complete genometRNA-dihydrouridine synthase A1e-75283
NC_012673:1600242:161494816149481615943996Exiguobacterium sp. AT1b, complete genomeTIM-barrel protein, nifR3 family2e-0756.6
NC_014541:475350:498726498726499691966Ferrimonas balearica DSM 9799 chromosome, complete genometRNA-U20-dihydrouridine synthase3e-1273.2
NC_007880:1456705:147982714798271480810984Francisella tularensis subsp. holarctica, complete genomeRNA dihydrouridine synthase A2e-60232
NC_003454:1346500:134656813465681347491924Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNitrogen regulation protein NIFR33e-1169.7
NC_007645:2408125:2414330241433024153791050Hahella chejuensis KCTC 2396, complete genometRNA-dihydrouridine synthase2e-70266
NC_014654:2138794:215474221547422155725984Halanaerobium sp. 'sapolanicus' chromosome, complete genomeTIM-barrel protein, nifR3 family6e-0962
NC_008358:263458:283755283755284741987Hyphomonas neptunium ATCC 15444, complete genometRNA-dihydrouridine synthase A6e-79294
NC_014632:402500:402591402591403526936Ilyobacter polytropus DSM 2926 chromosome, complete genomenifR3 family TIM-barrel protein2e-1067
NC_015675:4565500:458253245825324583530999Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTIM-barrel protein, yjbN family2e-75282
NC_003901:1568000:160671416067141607685972Methanosarcina mazei Go1, complete genomeNifR3-like protein2e-0860.5
NC_010505:2103887:210388721038872104846960Methylobacterium radiotolerans JCM 2831, complete genomedihydrouridine synthase DuS3e-75281
NC_010718:128423:129394129394130377984Natranaerobius thermophilus JW/NM-WN-LF, complete genomeTIM-barrel protein, nifR3 family7e-1065.1
NC_017505:1370128:1395902139590213970261125Neisseria meningitidis alpha710 chromosome, complete genomenifR3 protein6e-0755.1
NC_008767:1321129:1344689134468913456991011Neisseria meningitidis FAM18, complete genomehypothetical protein1e-0654.3
NC_017513:1331623:1359802135980213608121011Neisseria meningitidis G2136 chromosome, complete genomedihydrouridine synthase1e-0654.3
NC_007798:301456:306962306962307957996Neorickettsia sennetsu str. Miyayama, complete genomeputative tRNA-dihydrouridine synthase3e-1272.8
NC_014935:836868:850476850476851438963Nitratifractor saLSUginis DSM 16511 chromosome, complete genometim-barrel protein, nifr3 family2e-1170.5
NC_007614:109000:1365651365651375781014Nitrosospira multiformis ATCC 25196 chromosome 1, completeDihydrouridine synthase TIM-barrel protein nifR36e-1168.6
NC_008686:1383891:138784113878411388830990Paracoccus denitrificans PD1222 chromosome 1, complete sequencedihydrouridine synthase, DuS2e-74279
NC_009719:1135523:1154675115467511556821008Parvibaculum lavamentivorans DS-1 chromosome, complete genometRNA-dihydrouridine synthase A3e-76285
NC_009454:259022:259789259789260763975Pelotomaculum thermopropionicum SI, complete genometRNA-dihydrouridine synthase2e-1376.6
NC_008027:3953951:3968573396857339695741002Pseudomonas entomophila L48, complete genometRNA-dihydrouridine synthase A4e-71268
NC_016830:4639388:465387746538774654815939Pseudomonas fluorescens F113 chromosome, complete genometRNA dihydrouridine synthase A1e-67256
NC_004129:2201780:2205949220594922069591011Pseudomonas fluorescens Pf-5, complete genomeTIM-barrel protein, yjbN family3e-71268
NC_007492:4310828:432433343243334325328996Pseudomonas fluorescens PfO-1, complete genomeDihydrouridine synthase TIM-barrel protein yjbN1e-69263
NC_012660:1737423:1737423173742317384331011Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-dihydrouridine synthase A6e-69261
NC_020209:945000:951395951395952330936Pseudomonas poae RE*1-1-14, complete genometRNA-dihydrouridine synthase A5e-65248
NC_015733:1943385:194671419467141947652939Pseudomonas putida S16 chromosome, complete genometRNA-dihydrouridine synthase A2e-64246
NC_010501:1868888:187382018738201874785966Pseudomonas putida W619, complete genomeTIM-barrel protein, yjbN family2e-68259
NC_007005:2191500:2209059220905922100781020Pseudomonas syringae pv. syringae B728a, complete genomeDihydrouridine synthase TIM-barrel protein yjbN2e-68259
NC_007973:2150962:2162059216205921631141056Ralstonia metallidurans CH34 chromosome 1, complete sequenceTIM-barrel protein, yjbN family2e-72273
NC_016930:11721:125141251413509996Rickettsia philipii str. 364D chromosome, complete genometRNA-dihydrouridine synthase1e-1480.9
NC_016913:1134000:115505111550511156046996Rickettsia rickettsii str. Brazil chromosome, complete genometRNA-dihydrouridine synthase1e-1480.9
NC_016639:13188:131881318814183996Rickettsia slovaca 13-B chromosome, complete genomePutative dihydrouridine synthase Dus1e-1480.9
NC_017065:13188:131881318814183996Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative dihydrouridine synthase Dus1e-1480.9
NC_015977:3324000:334226733422673343202936Roseburia hominis A2-183 chromosome, complete genometRNA-dihydrouridine synthase1e-1171.2
NC_010067:3310336:3363923336392333649601038Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-74278
NC_017325:1488841:1501419150141915025761158Sinorhizobium meliloti SM11 chromosome, complete genometRNA-dihydrouridine synthase A4e-66251
NC_009442:1865244:1875348187534818763821035Streptococcus suis 05ZYH33 chromosome, complete genometRNA-dihydrouridine synthase2e-0757
NC_009443:1860390:1874722187472218757561035Streptococcus suis 98HAH33, complete genometRNA-dihydrouridine synthase2e-0757
NC_012926:1910882:1925244192524419262481005Streptococcus suis BM407 chromosome, complete genometRNA-dihydrouridine synthase2e-0757
NC_012925:1776450:1786584178658417875881005Streptococcus suis P1/7, complete genometRNA-dihydrouridine synthase2e-0757
NC_012924:1860631:1874993187499318759971005Streptococcus suis SC84, complete genometRNA-dihydrouridine synthase2e-0757
NC_015957:8816355:8832903883290388341231221Streptomyces violaceusniger Tu 4113 chromosome, complete genomeTIM-barrel protein, nifR3 family6e-0962
NC_007516:1847745:1846747184674718477481002Synechococcus sp. CC9605, complete genomeDihydrouridine synthase TIM-barrel protein nifR33e-1169.7
NC_007513:632884:6554266554266564961071Synechococcus sp. CC9902, complete genomeDihydrouridine synthase TIM-barrel protein nifR36e-0962
NC_010475:953618:9711229711229721831062Synechococcus sp. PCC 7002, complete genomeDihydrouridine synthase (Dus)1e-1584.3
NC_005070:617448:6409276409276419281002Synechococcus sp. WH 8102, complete genomeputative nitrogen regulation protein NifR3 family homolog6e-0962
NC_007759:723675:731735731735732715981Syntrophus aciditrophicus SB, complete genometRNA-dihydrouridine synthase5e-1272
NC_014410:2329838:2336619233661923376201002Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,TIM-barrel protein, nifR3 family1e-0964.3
NC_011653:748844:771421771421772311891Thermosipho africanus TCF52B, complete genomeNifR3 family protein6e-1272
NC_017278:1873934:1894791189479118958161026Thermus sp. CCB_US3_UF1 chromosome, complete genometRNA-dihydrouridine synthase6e-63241
NC_019940:2432689:2446066244606624471031038Thioflavicoccus mobilis 8321 chromosome, complete genometRNA dihydrouridine synthase A2e-78293
NC_014153:2282725:2289467228946722905161050Thiomonas intermedia K12 chromosome, complete genomeTIM-barrel protein, yjbN family4e-72271
NC_002978:4973:292132921330175963Wolbachia endosymbiont of Drosophila melanogaster, complete genomeNifR3 family protein3e-1789.7
NC_012416:4973:293392933930301963Wolbachia sp. wRi, complete genomeNifR3 family protein3e-1789.7
NC_015224:4101939:4108169410816941092151047Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-dihydrouridine synthase A2e-75283