Pre_GI: BLASTP Hits

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Query: NC_004463:5540924:5563519 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5563519, End: 5564733, Length: 1215

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011420:36272:3838538385409132529Rhodospirillum centenum SW, complete genomevirulence-associated protein E, putative2e-73276
NC_017986:5509569:5526345552634555285552211Pseudomonas putida ND6 chromosome, complete genomeTraC domain-containing protein5e-66251
NC_002947:3404000:3421840342184034240502211Pseudomonas putida KT2440, complete genomepyocin R2_PP, traC domain protein6e-66251
NC_004129:2201780:2215930221593022181672238Pseudomonas fluorescens Pf-5, complete genomeDNA primase domain protein4e-64245
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein3e-63243
NC_004578:3849835:3854392385439238566112220Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase domain protein1e-63243
NC_014623:1074299:1107875110787511101812307Stigmatella aurantiaca DW4/3-1 chromosome, complete genomevirulence-associated protein e2e-55216
NC_008390:2058500:2059577205957720620842508Burkholderia cepacia AMMD chromosome 1, complete sequencevirulence-associated E family protein2e-54213
NC_015381:1173603:1192541119254111952732733Burkholderia gladioli BSR3 chromosome 1, complete sequencepyocin R2_PP, TraC domain-containing protein1e-53210
NC_012724:3100430:3107328310732831098292502Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein3e-52206
NC_008095:1401919:1418714141871414213262613Myxococcus xanthus DK 1622, complete genomevirulence-associated protein E domain protein1e-51204
NC_012563:2680246:2683948268394826863712424Clostridium botulinum A2 str. Kyoto, complete genomevirulence-associated E domain protein7e-52204
NC_017337:321155:3371193371193395662448Staphylococcus aureus subsp. aureus ED133 chromosome, completevirulence-associated protein E2e-51203
NC_020126:4084114:4102816410281641051162301Myxococcus stipitatus DSM 14675, complete genomevirulence-associated protein E domain-containing protein5e-51202
NC_009699:2552195:2555998255599825584212424Clostridium botulinum F str. Langeland chromosome, complete genomevirulence-associated protein E4e-51202
NC_017297:2531750:2556138255613825585612424Clostridium botulinum F str. 230613 chromosome, complete genomeputative virulence-associated protein E4e-51202
NC_010079:1564327:1589034158903415914812448Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical bacteriophage protein3e-51202
NC_007793:1574456:1575087157508715775342448Staphylococcus aureus subsp. aureus USA300, complete genomevirulence-associated protein E3e-51202
NC_017338:1517723:1542429154242915448762448Staphylococcus aureus subsp. aureus JKD6159 chromosome, completevirulence-associated E family protein3e-51202
NC_011660:2541632:2567732256773225701702439Listeria monocytogenes HCC23 chromosome, complete genomevirulence-associated E family protein1e-50201
NC_002952:1592000:1618968161896816214152448Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-50200
NC_007168:1839382:1841834184183418442812448Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein5e-50198
NC_017179:1683199:1696029169602916984462418Clostridium difficile BI1, complete genomevirulence-associated protein e1e-48194
NC_013315:1679000:1688014168801416904312418Clostridium difficile CD196 chromosome, complete genomevirulence-associated protein e1e-48194
NC_009253:1265474:1272083127208312745392457Desulfotomaculum reducens MI-1 chromosome, complete genomevirulence-associated E family protein4e-48192
NC_014393:937000:9445859445859469572373Clostridium cellulovorans 743B chromosome, complete genomevirulence-associated E family protein2e-46187
NC_014923:3968000:3977192397719239786101419Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completevirulence-associated E family protein2e-45183
NC_010320:1268355:1278305127830512806502346Thermoanaerobacter sp. X514 chromosome, complete genomevirulence-associated E family protein4e-45182
NC_004668:295417:3020153020153044532439Enterococcus faecalis V583, complete genomehypothetical protein2e-44179
NC_009706:2673906:2728959272895927313252367Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-43177
NC_010337:2848360:2888069288806928904562388Heliobacterium modesticaldum Ice1, complete genomevirulence-associated protein e, putative2e-43176
NC_015520:2974048:2996411299641129987982388Mahella australiensis 50-1 BON chromosome, complete genomevirulence-associated E family protein3e-43176
NC_003909:386880:4009774009774033432367Bacillus cereus ATCC 10987, complete genomevirulence-associated protein E7e-43175
NC_011898:3367457:3402258340225834046242367Clostridium cellulolyticum H10, complete genomevirulence-associated E family protein7e-43175
NC_013941:3182576:3187690318769031898762187Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP-loop ATPase-like protein2e-42173
NC_015519:2526047:2529737252973725321422406Tepidanaerobacter sp. Re1 chromosome, complete genomevirulence-associated E family protein7e-42171
NC_014328:303063:3567403567403591032364Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage-like protein2e-41170
NC_021182:554000:5655985655985680182421Clostridium pasteurianum BC1, complete genomeputative P-loop ATPase4e-41169
NC_017190:3166000:3168463316846331708772415Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein4e-41169
NC_017347:2119000:2128469212846921299261458Staphylococcus aureus subsp. aureus T0131 chromosome, completePathogenicity island protein6e-40165
NC_017341:903473:9104009104009118571458Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,pathogenicity island protein6e-40165
NC_014219:3254268:3254268325426832566912424Bacillus selenitireducens MLS10 chromosome, complete genomevirulence-associated E family protein7e-40165
NC_011296:281930:2861472861472873611215Thermodesulfovibrio yellowstonii DSM 11347, complete genomepyocin R2_PP, TraC domain protein2e-39163
NC_013517:1480368:1491811149181114942312421Sebaldella termitidis ATCC 33386, complete genomevirulence-associated E family protein1e-38160
NC_017317:1291294:1305808130580813082672460Corynebacterium ulcerans 809 chromosome, complete genomevirulence-associated E family protein3e-38159
NC_012781:2552723:2576194257619425775221329Eubacterium rectale ATCC 33656, complete genomehypothetical protein7e-38158
NC_012781:700226:7212377212377225651329Eubacterium rectale ATCC 33656, complete genomehypothetical protein7e-38158
NC_015683:1296000:1309435130943513118942460Corynebacterium ulcerans BR-AD22 chromosome, complete genomevirulence-associated E family protein2e-37157
NC_013316:2033906:2084201208420120855291329Clostridium difficile R20291, complete genomehypothetical protein9e-38157
NC_005125:4093352:4095492409549240980112520Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-37156
NC_017294:115500:1241791241791266742496Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomevirulence-associated E family protein3e-36153
NC_014219:830966:8534298534298557802352Bacillus selenitireducens MLS10 chromosome, complete genomevirulence-associated E family protein5e-36152
NC_009633:4097536:4132929413292941352772349Alkaliphilus metalliredigens QYMF chromosome, complete genomevirulence-associated E family protein6e-36152
NC_016633:3069518:3106570310657031090082439Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative P-loop ATPase2e-35150
NC_015913:117966:1248621248621273642503Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome5e-35149
NC_015976:1893076:1921264192126419237532490Sphingobium sp. SYK-6, complete genomehypothetical protein1e-34147
NC_009485:5171658:5180072518007251822822211Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-31136
NC_013316:2033906:2064800206480020661581359Clostridium difficile R20291, complete genomehypothetical protein2e-30133
NC_012984:520000:5261575261575274311275Lactobacillus plantarum JDM1, complete genomeprophage Lp3 protein 8, helicase1e-29131
NC_012471:781063:7934387934387948381401Streptococcus equi subsp. equi 4047, complete genomephage protein2e-26120
NC_007413:3168931:3176621317662131787142094Anabaena variabilis ATCC 29413, complete genomeVirulence-associated E2e-26120
NC_016048:4047922:4065621406562140679632343Oscillibacter valericigenes Sjm18-20, complete genomevirulence-associated E family protein7e-22105
NC_005070:1088808:1092275109227510943412067Synechococcus sp. WH 8102, complete genomehypothetical protein8e-22105
NC_011001:2085986:2094115209411520955031389Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein4e-2099.4
NC_007513:1388641:1393386139338613945881203Synechococcus sp. CC9902, complete genomeP-loop ATPase and inactivated derivatives-like7e-1995.1
NC_010628:7493599:7499132749913275014172286Nostoc punctiforme PCC 73102, complete genomevirulence-associated E family protein5e-1892.4
NC_005070:334952:3501023501023520721971Synechococcus sp. WH 8102, complete genomehypothetical protein7e-1892
NC_014752:131994:1422961422961441431848Neisseria lactamica ST-640, complete genomehypothetical protein1e-1790.9
NC_014033:1564733:1576067157606715781812115Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-1582.8
NC_014655:1098428:1106577110657711087512175Leadbetterella byssophila DSM 17132 chromosome, complete genomevirulence-associated e family protein5e-1375.9
NC_007516:891681:907360907360907800441Synechococcus sp. CC9605, complete genome5e-1168.9
NC_016776:4115889:4127533412753341296922160Bacteroides fragilis 638R, complete genomehypothetical protein2e-1067.8
NC_015311:2626850:2659600265960026610361437Prevotella denticola F0289 chromosome, complete genomeVirulence-associated protein E3e-1066.6
NC_019960:1658657:1736006173600617373071302Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative P-loop ATPase5e-1066.2
NC_013730:6471484:6495471649547164977202250Spirosoma linguale DSM 74, complete genomeP-loop ATPase and inactivated derivatives-like protein4e-0962.8
NC_014033:675626:6786476786476798581212Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-0962.8
NC_016610:726128:7396707396707408751206Tannerella forsythia ATCC 43037 chromosome, complete genomeVirulence-associated protein E6e-0962.4
NC_013730:3956457:3966105396610539683512247Spirosoma linguale DSM 74, complete genomeP-loop ATPase and inactivated derivatives-like protein8e-0962
NC_010729:1014957:1026608102660810278131206Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-0860.8
NC_009615:1734752:1764735176473517668912157Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein7e-0858.5
NC_013222:3098409:3119734311973431219982265Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-0758.2
NC_020054:1666263:1680500168050016817261227Fibrella aestuarina BUZ 2 drat genomehypothetical protein1e-0758.2
NC_015311:2059879:2103009210300921042531245Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-0757.8
NC_019960:1126000:1133465113346511346551191Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative P-loop ATPase7e-0755.5