Pre_GI: BLASTP Hits

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Query: NC_004463:5540924:5553907 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5553907, End: 5554608, Length: 702

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:608500:620768620768621475708Pseudomonas mendocina ymp, complete genomehypothetical protein6e-67253
NC_012881:1802000:181666418166641817356693Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF458e-64243
NC_008313:1:140531405314766714Ralstonia eutropha H16 chromosome 1, complete sequencepredicted metal-dependent hydrolase5e-40164
NC_016002:1048420:107075310707531071505753Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein2e-39162
NC_015587:90539:102335102335103021687Hydrogenobaculum sp. SHO chromosome, complete genomeprotein of unknown function DUF451e-38160
NC_020411:90538:102334102334103020687Hydrogenobaculum sp. HO, complete genomeputative metal-dependent hydrolase1e-38160
NC_015557:90503:102299102299102985687Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein of unknown function DUF451e-38160
NC_013799:1:122641226412929666Hydrogenobacter thermophilus TK-6, complete genomeputative metal-dependent hydrolase3e-38158
NC_017161:1:123251232512990666Hydrogenobacter thermophilus TK-6 chromosome, complete genomehypothetical protein3e-38158
NC_018876:587094:614894614894615613720Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein1e-35149
NC_014209:1363151:138894013889401389614675Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function DUF452e-35149
NC_010003:1126800:113860011386001139271672Petrotoga mobilis SJ95, complete genomeprotein of unknown function DUF452e-34145
NC_008577:4533574:455257045525704553277708Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF454e-33141
NC_016047:2480921:248716224871622487836675Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completezinc metalloprotease4e-31134
NC_009076:75535:959769597696527552Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein4e-31134
NC_011726:3051408:305606430560643056747684Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF459e-31133
NC_013440:3813132:383641238364123837140729Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF452e-29129
NC_014314:1485500:151318815131881513871684Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein3e-29128
NC_009922:2323083:233260823326082333318711Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF455e-28124
NC_004369:256262:284851284851285555705Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-27121
NC_008346:2579756:259647425964742597157684Syntrophomonas wolfei subsp. wolfei str. Goettingen, completezinc metalloprotease9e-26117
NC_021184:3259908:327702332770233277727705Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase3e-24112
NC_018876:2151226:215688321568832157608726Methanolobus psychrophilus R15 chromosome, complete genomeprotein of unknown function DUF451e-23110
NC_003366:981105:985384985384985761378Clostridium perfringens str. 13, complete genomehypothetical protein2e-23108
NC_008601:753221:756324756324756983660Francisella tularensis subsp. novicida U112, complete genomepredicted metal-dependent hydrolase2e-22106
NC_016620:781995:800209800209800919711Bacteriovorax marinus SJ, complete genomehypothetical protein8e-22103
NC_016147:2266419:227062322706232271036414Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemetal-dependent hydrolase5e-21101
NC_010364:84900:960629606296787726Halobacterium salinarum R1, complete genomehypothetical protein2e-2099.4
NC_002607:81452:936349363494359726Halobacterium sp. NRC-1, complete genomehypothetical protein2e-2099.4
NC_003902:3430051:345001834500183450764747Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-2099
NC_007086:1457531:146002814600281460774747Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-2099
NC_012108:2194251:219857721985772199272696Desulfobacterium autotrophicum HRM2, complete genomemetal-dependent hydrolase family protein4e-2098.6
NC_006672:47610:623616236163098738Gluconobacter oxydans 621H plasmid pGOX1, complete sequencehypothetical protein6e-2097.8
NC_007575:973559:991742991742992401660Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein1e-1997.1
NC_005363:3562205:358651235865123587264753Bdellovibrio bacteriovorus HD100, complete genomeputative zinc metallo protease8e-2097.1
NC_015161:1556766:158660715866071587332726Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein1e-1996.3
NC_017095:166896:172440172440173216777Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative metal-dependent hydrolase2e-1996.3
NC_009524:1369395:136863413686341369398765Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein1e-1893.2
NC_014217:2760898:276659827665982767314717Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF453e-1892
NC_014414:1104386:111338811133881114113726Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein3e-1892
NC_010688:1435694:143817014381701438916747Xanthomonas campestris pv. campestris, complete genomehypothetical protein5e-1891.3
NC_012808:420334:442504442504443229726Methylobacterium extorquens AM1, complete genomeputative metal-dependent hydrolase2e-1789
NC_011757:577611:600296600296601021726Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF452e-1789
NC_010172:632180:654858654858655640783Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF454e-1788.2
NC_016023:267581:284280284280285002723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein9e-1787
NC_010725:594500:616747616747617472726Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF453e-1685.5
NC_010505:3690000:371095337109533711687735Methylobacterium radiotolerans JCM 2831, complete genomeprotein of unknown function DUF453e-1685.5
NC_015953:2349503:237063823706382371444807Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein3e-1685.5
NC_016803:2431672:244331024433102444038729Desulfovibrio desulfuricans ND132 chromosome, complete genomehypothetical protein6e-1684.3
NC_013592:446092:460082460082460804723Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF457e-1684.3
NC_007298:3764048:378960337896033790322720Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF451e-1583.6
NC_016616:1233555:125591812559181256694777Dechlorosoma suillum PS chromosome, complete genomeputative metal-dependent hydrolase1e-1583.2
NC_002937:1764117:177699817769981777741744Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein2e-1582.8
NC_007614:620500:632096632096632752657Nitrosospira multiformis ATCC 25196 chromosome 1, completeProtein of unknown function DUF454e-1581.6
NC_016642:757964:761247761247761987741Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein1e-1480.1
NC_011365:1969198:199482019948201995542723Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein2e-1479.3
NC_016023:1923170:193655119365511937273723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-1479
NC_006270:4149004:416263541626354163360726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1478.6
NC_006322:4149500:416275041627504163475726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1478.6
NC_015684:362236:394202394202394957756Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-1377
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF459e-1477
NC_012778:1573847:1583235158323515857902556Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-1375.9
NC_013209:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein4e-1374.7
NC_017100:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein4e-1374.7
NC_017108:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein4e-1374.7
NC_017111:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein4e-1374.7
NC_017121:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein4e-1374.7
NC_017125:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein4e-1374.7
NC_017146:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein4e-1374.7
NC_017150:160892:201228201228201905678Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein4e-1374.7
NC_014216:2334568:235084623508462351619774Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function DUF458e-1373.9
NC_015942:2213710:223315222331522233892741Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein4e-1272
NC_010581:2999002:304575830457583046489732Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein of unknown function DUF455e-1271.6
NC_012440:1215838:122285112228511223561711Persephonella marina EX-H1, complete genomezinc metalloprotease1e-1170.5
NC_018604:2579000:261007926100792610777699Brachyspira pilosicoli WesB complete genomeputative metal-dependent hydrolase1e-1170.1
NC_011283:5011497:501393050139305014646717Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1067
NC_013508:3188978:323937932393793240095717Edwardsiella tarda EIB202, complete genomehypothetical protein1e-1067
NC_015581:680460:683559683559684281723Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein1e-1066.6
NC_017187:814940:832640832640833353714Arcobacter butzleri ED-1, complete genomehypothetical protein2e-1065.9
NC_012779:3316877:332780833278083328524717Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1065.5
NC_012917:985617:100025410002541000970717Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-1065.1
NC_009665:2602000:262300026230002623743744Shewanella baltica OS185 chromosome, complete genomehypothetical protein4e-1065.1
NC_007356:51080:963479634797090744Dehalococcoides sp. CBDB1, complete genomeputative zinc protease7e-1064.3
NC_016051:1005188:101802710180271018689663Thermococcus sp. AM4 chromosome, complete genomehypothetical protein1e-0963.5
NC_015275:3243689:325730332573033257995693Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF451e-0963.5
NC_015320:1690047:169190316919031692589687Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein1e-0963.2
NC_011601:1114104:115026811502681150984717Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-0962.4
NC_008751:2060391:207008320700832070781699Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF458e-0960.8
NC_007681:1455425:147123014712301471799570Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein7e-0960.8
NC_009033:755226:765445765445766002558Staphylothermus marinus F1, complete genomeprotein of unknown function DUF451e-0860.5
NC_002937:1374532:138686213868621387560699Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein1e-0860.1
NC_004663:4373902:437876143787614379459699Bacteroides thetaiotaomicron VPI-5482, complete genomeputative zinc protease2e-0859.7
NC_015865:229883:235819235819236481663Thermococcus sp. 4557 chromosome, complete genomezinc-dependent protease2e-0859.7
NC_007164:1434305:146910814691081469854747Corynebacterium jeikeium K411, complete genomehypothetical protein2e-0859.7
NC_003366:981105:985047985047985406360Clostridium perfringens str. 13, complete genomehypothetical protein6e-0857.8
NC_021184:207492:211795211795212508714Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase1e-0757
NC_013929:3299736:333195433319543332676723Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-0756.6
NC_008025:2211813:222344422234442223758315Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF451e-0756.6
NC_016590:1380092:139055813905581391286729Burkholderia sp. YI23 chromosome 3, complete sequencezinc metalloprotease2e-0756.2
NC_011206:863987:868140868140868874735Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF453e-0755.8
NC_011761:684969:689122689122689856735Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein3e-0755.8
NC_010994:859500:878308878308879012705Rhizobium etli CIAT 652, complete genomehypothetical protein2e-0755.8
NC_013235:5127148:513992951399295140657729Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF452e-0755.8
NC_014550:2562053:258681325868132587532720Arthrobacter arilaitensis Re117, complete genomehypothetical protein4e-0755.1
NC_014934:3786132:379476837947683795481714Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein2e-0653.1
NC_021064:793098:808571808571809317747Propionibacterium avidum 44067, complete genomehypothetical protein4e-0651.6
NC_013173:953633:957260957260957982723Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF457e-0650.8