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Query: NC_004129:4596040:4616981 Pseudomonas fluorescens Pf-5, complete genome

Start: 4616981, End: 4617490, Length: 510

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008570:236500:250157250157250657501Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-1685.1
NC_009076:2396747:239795023979502398456507Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein1e-41168
NC_007434:2810548:281175128117512812257507Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein1e-41168
NC_007510:973828:982182982182982700519Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein3e-46184
NC_007645:2408125:242831224283122428827516Hahella chejuensis KCTC 2396, complete genomehypothetical protein7e-23106
NC_020126:1943092:195897019589701959530561Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1375.1
NC_008095:2497842:250277925027792503306528Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-21101
NC_009656:44500:648876488765393507Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-44176
NC_003296:1927616:194935719493571949869513Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein3e-38157
NC_009481:764382:780927780927781457531Synechococcus sp. WH 7803 chromosome, complete genomehypothetical protein4e-23107