Pre_GI: BLASTP Hits

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Query: NC_004129:3452885:3458506 Pseudomonas fluorescens Pf-5, complete genome

Start: 3458506, End: 3459366, Length: 861

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:2331617:234855423485542349414861Pseudomonas entomophila L48, complete genomehypothetical protein2e-150531
NC_004547:2470978:247546824754682476352885Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-95347
NC_013173:1356526:138926413892641390073810Desulfomicrobium baculatum DSM 4028, complete genomeDNA ligase III4e-61234
NC_008782:867344:867344867344868051708Acidovorax sp. JS42, complete genomeDNA ligase III-like protein2e-21102
NC_009720:4124255:414251941425194143211693Xanthobacter autotrophicus Py2, complete genomeDNA ligase III-like protein3e-21102