Pre_GI: BLASTN Hits

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Query: NC_003923:1436139 Staphylococcus aureus subsp. aureus MW2, complete genome

Start: 1436139, End: 1477099, Length: 40961

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a community-acquired methicillin-resistant (MSRA) strain and is one of the major pathogens causing community-acquired infections in the Midwestern USA. Several fatal infections were attributed to this strain in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002953:14646931464693150259937907Staphylococcus aureus subsp. aureus MSSA476, complete genome035610BLASTN svgBLASTP svg
NC_010079:14653561465356150892843573Staphylococcus aureus subsp. aureus USA300_TCH1516, complete032480BLASTN svgBLASTP svg
NC_007793:14514091451409149409942691Staphylococcus aureus subsp. aureus USA300, complete genome032480BLASTN svgBLASTP svg
NC_002951:14744651474465151709942635Staphylococcus aureus subsp. aureus COL, complete genome032460BLASTN svgBLASTP svg
NC_007795:13705001370500141025039751Staphylococcus aureus subsp. aureus NCTC 8325, complete genome032370BLASTN svgBLASTP svg
NC_002758:15089961508996155209943104Staphylococcus aureus subsp. aureus Mu50, complete genome030830BLASTN svgBLASTP svg
NC_009782:15103961510396155316542770Staphylococcus aureus subsp. aureus Mu3, complete genome030720BLASTN svgBLASTP svg
NC_002745:14325851432585147535342769Staphylococcus aureus subsp. aureus N315, complete genome030720BLASTN svgBLASTP svg
NC_002952:14977851497785154549547711Staphylococcus aureus subsp. aureus MRSA252, complete genome025950BLASTN svgBLASTP svg
NC_007622:13974071397407142300525599Staphylococcus aureus RF122, complete genome09020BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome1e-89339BLASTN svgBLASTP svg
NC_004461:11326701132670117165138982Staphylococcus epidermidis ATCC 12228, complete genome2e-45192BLASTN svgBLASTP svg
NC_002976:10214901021490105865837169Staphylococcus epidermidis RP62A, complete genome2e-45192BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome8e-45190BLASTN svgBLASTP svg
NC_020164:13567981356798139001033213Staphylococcus warneri SG1, complete genome1e-43186BLASTN svgBLASTP svg
NC_007622:2239799*2239799227094331145Staphylococcus aureus RF122, complete genome8e-42180BLASTN svgBLASTP svg
NC_013893:2373730*2373730239918425455Staphylococcus lugdunensis HKU09-01 chromosome, complete genome4e-31145BLASTN svgBLASTP svg
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome4e-31145BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome3e-29139BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome3e-29139BLASTN svgBLASTP svg
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome3e-29139BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome6e-27131BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome9e-23117BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete9e-23117BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome4e-22115BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome4e-22115BLASTN svgBLASTP svg
NC_002952:25505002550500257443923940Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-20109BLASTN svgBLASTP svg
NC_007622:1558753*1558753157743218680Staphylococcus aureus RF122, complete genome6e-18101BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007622:1751500*1751500177342921930Staphylococcus aureus RF122, complete genome8e-0867.9BLASTN svgBLASTP svg