Pre_GI: BLASTP Hits

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Query: NC_003912:472000:485862 Campylobacter jejuni RM1221, complete genome

Start: 485862, End: 486623, Length: 762

Host Lineage: Campylobacter jejuni; Campylobacter; Campylobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This strain (RM1221; ATCC BAA-1062) was isolated from the skin of a retail chicken by the Produce Safety and Microbiology Research Unit (Western Regional Research Center, Albany, CA) and minimally passaged. Causes food poisoning. This organism is the leading cause of bacterial food poisoning (campylobacteriosis) in the world, and is more prevalent than Salmonella enteritis (salmonellosis). Found throughout nature, it can colonize the intestines of both mammals and birds, and transmission to humans occurs via contaminated food products. This organism can invade the epithelial layer by first attaching to epithelial cells, then penetrating through them. Systemic infections can also occur causing more severe illnesses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017281:433995:447831447831448592762Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeIclR family transcriptional regulator4e-92337
NC_017279:437665:452356452356453117762Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeIclR family transcriptional regulator1e-91335
NC_020418:1841138:185345618534561854229774Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulator, IclR family1e-24113
NC_004460:973738:987891987891988673783Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator1e-1376.6
NC_016633:14000:329083290833870963Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometranscriptional regulator2e-1376.6
NC_015949:47414:557195571956513795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator4e-1375.1
NC_015949:428923:438325438325439119795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator4e-1375.1
NC_014652:163347:170037170037170810774Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, iclr family7e-1374.3
NC_014721:2043910:204995520499552050749795Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional regulator, iclr family1e-1273.9
NC_018000:1852691:187154618715461872355810Sinorhizobium fredii USDA 257 chromosome, complete genomeacetate operon repressor2e-1272.8
NC_012669:4118230:412893741289374129710774Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, IclR family3e-1272
NC_009655:1626466:163827816382781639075798Actinobacillus succinogenes 130Z chromosome, complete genometranscriptional regulator IclR6e-1271.2
NC_014657:2236193:225991522599152260712798Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, iclr family8e-1270.9
NC_016048:308342:343421343421344185765Oscillibacter valericigenes Sjm18-20, complete genomeputative IclR family transcriptional regulator2e-1169.3
NC_012912:2216749:223158522315852232376792Dickeya zeae Ech1591, complete genometranscriptional regulator, IclR family3e-1168.9
NC_012880:2425330:243403424340342434825792Dickeya dadantii Ech703, complete genometranscriptional regulator, IclR family3e-1168.9
NC_005139:518760:535254535254536063810Vibrio vulnificus YJ016 chromosome I, complete sequencetranscriptional regulator3e-1168.9
NC_014500:2589089:259686025968602597651792Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein KdgR3e-1168.9
NC_014392:2311243:231796223179622318795834Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, IclR family4e-1168.6
NC_008593:640000:648290648290649051762Clostridium novyi NT, complete genometranscription regulator (IclR family) BH21374e-1168.6
NC_015589:2447132:244890124489012449674774Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR7e-1167.8
NC_011830:4645453:465649246564924657265774Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, IclR family2e-1066.2
NC_006087:28490:625956259563383789Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, IclR family3e-1065.5
NC_011001:163813:181278181278182174897Burkholderia cenocepacia J2315 chromosome 2, complete sequencetranscriptional regulator KdgR4e-1065.5
NC_007644:416000:418409418409419215807Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family5e-1065.1
NC_019978:2532640:254798025479802548762783Halobacteroides halobius DSM 5150, complete genometranscriptional regulator7e-1064.3
NC_013729:4871430:488413648841364884891756Kribbella flavida DSM 17836, complete genometranscriptional regulator, IclR family8e-1064.3
NC_014532:2298628:230572923057292306538810Halomonas elongata DSM 2581, complete genometranscriptional regulator KdgR9e-1063.9
NC_007503:1111457:113341811334181134203786Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator, IclR family1e-0963.5
NC_011894:6708970:671845467184546719275822Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, IclR family2e-0963.2
NC_014121:677799:677799677799678557759Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage predicted DNA-binding transcriptional regulator4e-0962
NC_016514:506611:509638509638510396759Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YagI5e-0961.6
NC_020134:845164:851861851861852637777Clostridium stercorarium subsp. stercorarium DSM 8532, completepectin degradation repressor protein KdgR6e-0961.2
NC_000913:272071:287628287628288386759Escherichia coli K12, complete genomeCP4-6 prophage; predicted DNA-binding transcriptional regulator6e-0961.2
AC_000091:273325:287628287628288386759Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-0961.2
NC_014323:625155:639729639729640526798Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein9e-0960.8
NC_010473:247429:2617322617322639362205Escherichia coli str. K-12 substr. DH10B, complete genome1e-0860.5
NC_007644:362000:379800379800380564765Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family1e-0860.1
NC_018870:484000:489181489181489951771Thermacetogenium phaeum DSM 12270 chromosome, complete genomeHTH-type transcriptional regulator3e-0858.9
NC_014206:1618988:162671116267111627487777Geobacillus sp. C56-T3 chromosome, complete genomeIclR family transcriptional regulator4e-0858.5
NC_009142:1701000:171626517162651717011747Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, IclR family7e-0857.8
NC_009512:5920960:593641859364185937254837Pseudomonas putida F1, complete genomeregulatory protein, IclR7e-0857.8
NC_006510:1995916:201138620113862012162777Geobacillus kaustophilus HTA426, complete genometranscriptional regulator7e-0857.8
NC_008726:4725389:473456147345614735364804Mycobacterium vanbaalenii PYR-1, complete genomeregulatory proteins, IclR1e-0757.4
NC_015565:2027279:204943020494302050236807Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeIclR family transcriptional regulator1e-0756.6
NC_015732:684000:686748686748687509762Spirochaeta caldaria DSM 7334 chromosome, complete genomeIclR family transcriptional regulator1e-0756.6
NC_016584:593954:606783606783607556774Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator2e-0756.6
NC_013744:462520:469728469728470492765Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completetranscriptional regulator, IclR family3e-0755.8
NC_010718:1229355:122935512293551230158804Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, IclR family5e-0755.1
NC_005126:142500:146503146503147273771Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0653.1
NC_012691:1250385:127547512754751276257783Tolumonas auensis DSM 9187, complete genometranscriptional regulator, IclR family3e-0652.4
NC_009483:1636189:165581316558131656577765Geobacter uraniireducens Rf4 chromosome, complete genomeregulatory protein IclR5e-0651.6
NC_009792:4693152:471779447177944718549756Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0651.6
NC_015573:813000:839785839785840549765Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeIclR family transcriptional regulator8e-0651.2