Pre_GI: BLASTP Hits

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Query: NC_003155:6295078:6320308 Streptomyces avermitilis MA-4680, complete genome

Start: 6320308, End: 6321087, Length: 780

Host Lineage: Streptomyces avermitilis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (ATCC 31267) was isolated and characterized in 1978 by R. Burg and colleagues from a soil sample collected in Shizuoka Prefecture, Japan. Antibiotic-producing bacterium. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This organism is a well known producer of the anti-parasitic agent avermectin which is widely used to rid livestock of worm and insect infestations and to protect large numbers of people from river blindness in sub-Saharan Africa.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:6371019:637364563736456374424780Streptomyces scabiei 87.22 chromosome, complete genomeNagD-like phosphatase3e-139494
NC_008278:6717485:672428267242826725208927Frankia alni ACN14a, complete genomeN-acetylglucosamine-6-phosphate deacetylase5e-102370
NC_019673:526000:529304529304530092789Saccharothrix espanaensis DSM 44229 complete genomeProtein NagD4e-99360
NC_007677:1847913:185883218588321859614783Salinibacter ruber DSM 13855, complete genomeprotein nagD7e-99360
NC_014032:1911500:192220619222061923033828Salinibacter ruber M8 chromosome, complete genomeN-acetylglucosamine-6-phosphate deacetylase NagD7e-99360
NC_014246:611275:624555624555625382828Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative pyridoxal phosphatase3e-98358
NC_020302:2190500:220097122009712201780810Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein2e-95348
NC_016048:375676:380516380516381259744Oscillibacter valericigenes Sjm18-20, complete genomenucleotide monophosphatase6e-69260
NC_015873:63487:816048160482401798Megasphaera elsdenii DSM 20460, complete genomeHAD-superfamily hydrolase2e-67255
NC_015732:3017387:303572130357213036506786Spirochaeta caldaria DSM 7334 chromosome, complete genomeHAD-superfamily hydrolase1e-65249
NC_015424:1689500:172469517246951725444750Aeromonas veronii B565 chromosome, complete genomeHAD-superfamily hydrolase4e-60231
NC_012108:1067876:109418010941801095037858Desulfobacterium autotrophicum HRM2, complete genomeNagD8e-60230
NC_011134:1222739:123904112390411239808768Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehydrolase HAD superfamily5e-45181
NC_012470:853561:855454855454856221768Streptococcus equi subsp. zooepidemicus, complete genomehaloacid dehalogenase-like hydrolase6e-45181
NC_009513:618000:621707621707622477771Lactobacillus reuteri F275, complete genomeHAD-superfamily subfamily IIA hydrolase like protein3e-44178
NC_012004:1053682:105755910575591058323765Streptococcus uberis 0140J, complete genomehaloacid dehalogenase-like hydrolase2e-43176
NC_015697:1814128:181873518187351819505771Lactobacillus reuteri SD2112 chromosome, complete genomeN-acetylglucosamine metabolism protein NagD6e-43174
NC_005362:550823:554565554565555347783Lactobacillus johnsonii NCC 533, complete genomehypothetical protein8e-41167
NC_013198:813830:817381817381818157777Lactobacillus rhamnosus GG, complete genomeHAD-superfamily hydrolase, sugar phosphatase, subfamily IIA8e-40164
NC_013199:811929:811929811929812705777Lactobacillus rhamnosus Lc 705, complete genomesugar phosphatase, HAD superfamily, subfamily IIA8e-40164
NC_010999:880878:880878880878881654777Lactobacillus casei, complete genomeN-acetylglucosamine catabolic protein8e-40164
NC_014334:769205:769858769858770634777Lactobacillus casei str. Zhang chromosome, complete genomeputative sugar phosphatase of the HAD superfamily8e-40164
NC_007929:473500:476271476271477044774Lactobacillus salivarius subsp. salivarius UCC118, complete genomeN-acetylglucosamine catabolic protein6e-40164
NC_008526:817628:818281818281819057777Lactobacillus casei ATCC 334, complete genomePredicted sugar phosphatase of the HAD superfamily2e-39162
NC_013504:447891:451633451633452415783Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein4e-39161
NC_008530:469802:473553473553474335783Lactobacillus gasseri ATCC 33323, complete genomePredicted sugar phosphatase of the HAD superfamily2e-38159
NC_008525:1202852:121757312175731218349777Pediococcus pentosaceus ATCC 25745, complete genomePredicted sugar phosphatase of the HAD superfamily4e-38158
NC_016605:766836:771155771155771928774Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehydrolase, haloacid dehalogenase family8e-38157
NC_015975:1493636:151448015144801515253774Lactobacillus ruminis ATCC 27782 chromosome, complete genomeN-acetylglucosamine catabolic protein1e-37156
NC_019942:1370872:138540813854081386166759Aciduliprofundum sp. MAR08-339, complete genomeputative sugar phosphatase of HAD superfamily3e-37155
NC_000868:1562000:156950015695001570288789Pyrococcus abyssi GE5, complete genomehypopthetical 4-nitrophenylphosphatase.8e-37154
NC_007576:435713:440301440301441086786Lactobacillus sakei subsp. sakei 23K, complete genomePutative sugar phosphatase, HAD superfamily9e-37153
NC_016051:1849905:186403818640381864862825Thermococcus sp. AM4 chromosome, complete genome4-nitrophenylphosphatase9e-37153
NC_015474:723553:775504775504776295792Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein4e-35148
NC_014624:171394:172578172578173372795Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-33143
NC_014804:1898419:191536919153691916166798Thermococcus barophilus MP chromosome, complete genomeHypothetical NagD phosphatase1e-33143
NC_011529:1685834:169284716928471693653807Thermococcus onnurineus NA1, complete genomeHypothetical sugar phosphatase1e-33143
NC_014727:1537183:155387815538781554648771Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,sugar phosphatase of the had superfamily3e-33141
NC_003454:1889529:191115519111551911982828Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNagD protein3e-32139
NC_006814:403723:410230410230411006777Lactobacillus acidophilus NCFM, complete genomen-acetylglucosamine catabolic protein2e-31136
NC_015944:384119:3970483970483982771230Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceputative sugar phosphatase of HAD superfamily4e-31135
NC_013769:123958:134758134758135552795Sulfolobus islandicus L.D.8.5 chromosome, complete genomeHAD-superfamily hydrolase6e-31134
NC_018528:446610:451489451489452268780Lactobacillus helveticus R0052 chromosome, complete genomeHaloacid dehalogenase family hydrolase1e-30133
NC_014106:419511:424339424339425109771Lactobacillus crispatus ST1, complete genomeHAD superfamily hydrolase, subfamily IIA3e-30132
NC_003454:677699:685375685375686133759Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete4-nitrophenylphosphatase3e-30132
NC_010080:445398:447417447417448175759Lactobacillus helveticus DPC 4571, complete genomeputative sugar phosphatase3e-30132
NC_014721:314990:316261316261317088828Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehad-superfamily hydrolase, subfamily iia3e-30132
NC_015214:437733:443845443845444615771Lactobacillus acidophilus 30SC chromosome, complete genomen-acetylglucosamine catabolic protein8e-30130
NC_015602:117939:121730121730122500771Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeputative sugar phosphatase1e-29130
NC_020210:1951746:195295419529541953754801Geobacillus sp. GHH01, complete genomearabinose operon protein2e-29129
NC_014724:439594:446573446573447343771Lactobacillus amylovorus GRL 1112 chromosome, complete genomen-acetylglucosamine catabolic protein3e-29129
NC_014844:659829:705346705346706185840Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeHAD-superfamily hydrolase4e-29128
NC_014624:1675500:173063317306331731379747Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-29127
NC_020134:845164:849387849387850199813Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative hydrolase YutF1e-28126
NC_013411:2767400:277054527705452771348804Geobacillus sp. Y412MC61, complete genomeHAD-superfamily hydrolase, subfamily IIA1e-28126
NC_014915:1909275:191048319104831911286804Geobacillus sp. Y412MC52 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIA1e-28126
NC_014206:1694330:172124617212461722046801Geobacillus sp. C56-T3 chromosome, complete genomeHAD-superfamily hydrolase2e-28125
NC_009725:496443:5486775486775499121236Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-27121
NC_020410:495184:5312675312675325051239Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized 45.4 kDa protein in thiaminase I 5'region (Protein nagD homolog)5e-27121
NC_009376:446224:463928463928464698771Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeHAD family hydrolase3e-25115
NC_013510:2521186:2541999254199925430031005Thermomonospora curvata DSM 43183, complete genomeHAD-superfamily hydrolase, subfamily IIA2e-24112
NC_012803:1552122:155589715558971556727831Micrococcus luteus NCTC 2665, complete genomehaloacid dehalogenase subfamily IIA protein5e-23108
NC_015588:1463628:1479007147900714800201014Isoptericola variabilis 225 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIA2e-22106
NC_005773:4899252:491604349160434916825783Pseudomonas syringae pv. phaseolicola 1448A, complete genomehydrolase, HAD-superfamily, subfamily IIA2e-2099.4
NC_016783:1169821:117477111747711175766996Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein3e-2099
NC_014829:4088494:410685741068574107663807Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIA3e-2099
NC_009376:446224:464692464692465480789Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeHAD family hydrolase7e-2097.8
NC_014393:187454:212785212785213543759Clostridium cellulovorans 743B chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIA5e-1994.7
NC_018750:1591895:1593438159343815945291092Streptomyces venezuelae ATCC 10712, complete genome4-nitrophenylphosphatase7e-1994.4
NC_007796:3116293:313104631310463131819774Methanospirillum hungatei JF-1, complete genomeHAD-superfamily subfamily IIA hydrolase, hypothetical 26e-1891.3
NC_012669:1700626:172472517247251725585861Beutenbergia cavernae DSM 12333, complete genomeHAD-superfamily hydrolase, subfamily IIA5e-1788.2
NC_018720:1336839:1359208135920813602721065Bifidobacterium asteroides PRL2011 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IIA1e-1686.7
NC_017219:2014605:2033948203394820349881041Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-1480.5
NC_011593:2014787:2034130203413020351701041Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,HAD-superfamily hydrolase1e-1480.5
NC_008358:2574343:257883825788382579623786Hyphomonas neptunium ATCC 15444, complete genomehydrolase, haloacid dehydrogenase (HAD) family9e-1270.9
NC_014166:401815:412227412227413006780Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHAD-superfamily hydrolase1e-1170.1
NC_014935:1999653:200965720096572010400744Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehaloacid dehalogenase domain protein hydrolase8e-1167.8
NC_009832:4482500:450538445053844506190807Serratia proteamaculans 568, complete genomeHAD-superfamily subfamily IIA hydrolase like protein2e-0963.2
NC_008740:3602367:360400236040023604949948Marinobacter aquaeolei VT8, complete genomeHAD-superfamily hydrolase, subfamily IIA4e-0962
NC_018644:210627:227733227733228581849Alpha proteobacterium HIMB59 chromosome, complete genomeHAD-superfamily class IIA hydrolase, TIGR014591e-0860.5
NC_009929:58465:832738327384064792Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceHAD-superfamily subfamily IIA hydrolase like protein, putative2e-0859.7