Pre_GI: BLASTP Hits

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Query: NC_003155:6295078:6316485 Streptomyces avermitilis MA-4680, complete genome

Start: 6316485, End: 6317579, Length: 1095

Host Lineage: Streptomyces avermitilis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (ATCC 31267) was isolated and characterized in 1978 by R. Burg and colleagues from a soil sample collected in Shizuoka Prefecture, Japan. Antibiotic-producing bacterium. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This organism is a well known producer of the anti-parasitic agent avermectin which is widely used to rid livestock of worm and insect infestations and to protect large numbers of people from river blindness in sub-Saharan Africa.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:2766910:2766910276691027680161107Streptomyces fulvissimus DSM 40593, complete genomePutative oxidoreductase9e-129460
NC_015859:1099919:1127758112775811287951038Corynebacterium variabile DSM 44702 chromosome, complete genomeputative oxidoreductase8e-74277
NC_013172:3093467:3104865310486531059411077Brachybacterium faecium DSM 4810, complete genomepredicted dehydrogenase1e-57224
NC_005945:3359598:3362071336207133631021032Bacillus anthracis str. Sterne, complete genomeoxidoreductase, Gfo/Idh/MocA family6e-55214
NC_016628:1190366:1190366119036611914061041Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceputative dehydrogenase9e-55214
NC_007434:111607:1303461303461313981053Burkholderia pseudomallei 1710b chromosome I, complete sequenceoxidoreductase, Gfo/Idh/MocA family2e-54213
NC_009076:3876733:3895667389566738967191053Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical oxidoreductase YdgJ2e-54213
NC_014121:2330451:2353387235338723544271041Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative oxidoreductase9e-54211
NC_006350:3957454:3981885398188539829881104Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative oxidoreductase2e-53210
NC_004578:3921199:3942270394227039432891020Pseudomonas syringae pv. tomato str. DC3000, complete genomeoxidoreductase, Gfo/Idh/MocA family2e-53210
NC_014623:7482229:7534984753498475360901107Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeGfo/Idh/MocA family oxidoreductase3e-49196
NC_015709:1459838:1505104150510415061771074Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeoxidoreductase domain-containing protein8e-49194
NC_021066:1712905:1717114171711417181961083Raoultella ornithinolytica B6, complete genomeoxidoreductase domain-containing protein3e-47189
NC_014618:2788533:2796224279622427973061083Enterobacter cloacae SCF1 chromosome, complete genomeoxidoreductase domain-containing protein7e-47187
NC_003296:1341353:1343455134345513446061152Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE OXIDOREDUCTASE PROTEIN5e-46185
NC_012803:1094679:1107565110756511086951131Micrococcus luteus NCTC 2665, complete genomepredicted dehydrogenase1e-45184
NC_020181:969599:9926739926739937551083Enterobacter aerogenes EA1509E, complete genomeOxidoreductase8e-44177
NC_008060:3155133:3203444320344432044961053Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceoxidoreductase-like3e-43176
NC_013521:1713416:1728079172807917291101032Sanguibacter keddieii DSM 10542, complete genomepredicted dehydrogenase3e-38159
NC_006958:179690:1796901796901807151026Corynebacterium glutamicum ATCC 13032, complete genomeHYPOTHETICAL OXIDOREDUCTASE7e-34144
NC_003450:179689:1796891796891807141026Corynebacterium glutamicum ATCC 13032, complete genomedehydrogenase7e-34144
NC_019892:7734519:7738437773843777394801044Singulisphaera acidiphila DSM 18658 chromosome, complete genomedehydrogenase2e-33143
NC_015520:224136:2383092383092393611053Mahella australiensis 50-1 BON chromosome, complete genomeoxidoreductase domain-containing protein5e-1995.5
NC_015389:1977736:1997475199747519985391065Coriobacterium glomerans PW2 chromosome, complete genomeoxidoreductase domain protein3e-1479.7
NC_015145:3657103:3663735366373536648411107Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedehydrogenase5e-1375.9
NC_014391:2579919:2613544261354426146741131Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeoxidoreductase domain-containing protein4e-1375.9
NC_009615:3308538:3326849332684933278741026Parabacteroides distasonis ATCC 8503 chromosome, complete genomedehydrogenase1e-1171.2
NC_008595:2661019:2681324268132426824061083Mycobacterium avium 104, complete genomeoxidoreductase family protein, NAD-binding Rossmann fold protein2e-1170.5
NC_015555:1792242:1801285180128518024451161Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeoxidoreductase domain protein3e-1169.7
NC_014410:989698:9976909976909988501161Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,oxidoreductase domain protein5e-1168.9
NC_020995:751311:7672057672057683651161Enterococcus casseliflavus EC20, complete genomehypothetical protein7e-1168.6
NC_016642:757964:7735057735057747011197Pseudovibrio sp. FO-BEG1 chromosome, complete genomeoxidoreductase domain-containing protein7e-1168.6
NC_019970:929666:9386599386599398191161Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative dehydrogenase3e-1066.2
NC_013406:3672857:3701264370126437024241161Paenibacillus sp. Y412MC10 chromosome, complete genomeoxidoreductase domain-containing protein5e-1065.9
NC_015061:1251905:1254189125418912553641176Rahnella sp. Y9602 chromosome, complete genomeoxidoreductase domain protein5e-1065.9
NC_014829:722000:7309047309047319861083Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeoxidoreductase domain protein6e-1065.5
NC_013956:1810026:1821781182178118229981218Pantoea ananatis LMG 20103 chromosome, complete genomeYdgJ2e-0963.9
NC_014392:355443:3578633578633589061044Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeoxidoreductase domain protein2e-0963.5
NC_008595:1911491:1931111193111119321931083Mycobacterium avium 104, complete genomeoxidoreductase family protein, NAD-binding Rossmann fold protein2e-0963.5
NC_016818:1291665:1292987129298712941621176Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative dehydrogenase3e-0963.2
NC_006177:2883476:2887545288754528886301086Symbiobacterium thermophilum IAM 14863, complete genomeputative oxidoreductase4e-0962.4
NC_016816:2684336:2718764271876427199421179Pantoea ananatis LMG 5342, complete genomeoxidoreductase Gfo/Idh/MocA family6e-0962
NC_014841:131308:1366321366321377021071Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceoxidoreductase domain protein7e-0962
NC_014650:2143033:215465621546562155654999Geobacillus sp. Y4.1MC1 chromosome, complete genomeoxidoreductase domain-containing protein8e-0961.6
NC_014623:243593:2456012456012467671167Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeGfo/Idh/MocA family oxidoreductase8e-0961.6
NC_014023:24000:3518635186364001215Bacillus megaterium QM B1551 plasmid pBM700, complete sequenceoxidoreductase, Gfo/Idh/Moca family1e-0861.2
NC_011959:131800:1394131394131404651053Thermomicrobium roseum DSM 5159, complete genomeprobable nadh-dependent dyhydrogenase3e-0860.1
NC_014655:17641:274552745528435981Leadbetterella byssophila DSM 17132 chromosome, complete genomemyo-inositol 2-dehydrogenase3e-0860.1
NC_012034:390273:3927253927253937681044Anaerocellum thermophilum DSM 6725, complete genomeoxidoreductase domain protein3e-0859.7
NC_018644:602200:6164766164766174801005Alpha proteobacterium HIMB59 chromosome, complete genomeNAD-binding glucose/fructose oxidoreductase Rossman fold family protein7e-0858.5
NC_014838:589581:6066836066836078641182Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceoxidoreductase domain-containing protein7e-0858.5
NC_015663:3466471:3487092348709234882161125Enterobacter aerogenes KCTC 2190 chromosome, complete genomeoxidoreductase1e-0757.8
NC_008391:111217:130208130208131200993Burkholderia cepacia AMMD chromosome 2, complete sequenceInositol 2-dehydrogenase2e-0757.4
NC_015567:2125415:2143799214379921449711173Serratia sp. AS9 chromosome, complete genomeoxidoreductase domain-containing protein2e-0757.4
NC_015566:2125403:2143787214378721449591173Serratia sp. AS12 chromosome, complete genomeoxidoreductase domain-containing protein2e-0757.4
NC_020054:2033982:2050325205032520514701146Fibrella aestuarina BUZ 2 drat genomeoxidoreductase domain protein2e-0757
NC_014297:1336773:1342957134295713440421086Halalkalicoccus jeotgali B3 chromosome, complete genomeoxidoreductase2e-0757
NC_014121:598669:6138726138726150561185Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0756.6
NC_011026:3009500:3012897301289730139011005Chloroherpeton thalassium ATCC 35110, complete genomeoxidoreductase domain protein3e-0756.6
NC_008578:591357:6142786142786154681191Acidothermus cellulolyticus 11B, complete genomeoxidoreductase domain protein3e-0756.2
NC_015703:5391478:5411452541145254124681017Runella slithyformis DSM 19594 chromosome, complete genomeoxidoreductase domain-containing protein3e-0756.2
NC_012914:970000:9908559908559919551101Paenibacillus sp. JDR-2, complete genomeoxidoreductase domain protein6e-0755.5
NC_013922:331847:3318473318473330491203Natrialba magadii ATCC 43099 chromosome, complete genomeoxidoreductase domain protein9e-0755.1
NC_017275:2176000:2199482219948222005761095Sulfolobus islandicus HVE10/4 chromosome, complete genomeoxidoreductase domain-containing protein8e-0755.1
NC_017276:2053790:2077610207761020787041095Sulfolobus islandicus REY15A chromosome, complete genomeoxidoreductase domain-containing protein8e-0755.1
NC_012589:2275276:2300504230050423015981095Sulfolobus islandicus L.S.2.15, complete genomeoxidoreductase domain protein8e-0755.1
NC_014622:653599:6685976685976696731077Paenibacillus polymyxa SC2 chromosome, complete genomeoxidoreductase domain-containing protein8e-0755.1
NC_015387:155728:1663421663421673581017Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeoxidoreductase domain protein1e-0654.7
NC_015633:1702000:1708331170833117095061176Vibrio anguillarum 775 chromosome chromosome I, complete sequenceNAD-dependent oxidoreductase1e-0654.3
NC_014650:2143033:2153424215342421546321209Geobacillus sp. Y4.1MC1 chromosome, complete genomeoxidoreductase domain-containing protein2e-0653.9
NC_013517:4208939:4251026425102642520391014Sebaldella termitidis ATCC 33386, complete genomeoxidoreductase domain protein2e-0653.5
NC_006510:1921541:1928988192898819300131026Geobacillus kaustophilus HTA426, complete genomeoxidoreductase3e-0653.1
NC_013410:2519441:2543107254310725443301224Fibrobacter succinogenes subsp. succinogenes S85 chromosome,oxidoreductase domain-containing protein3e-0653.1
NC_007614:261588:2765202765202776261107Nitrosospira multiformis ATCC 25196 chromosome 1, completeoxidoreductase-like4e-0652.8
NC_008010:200796:1996181996182007991182Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceoxidoreductase-like5e-0652.4
NC_011985:61003:9831698316994401125Agrobacterium radiobacter K84 chromosome 1, complete genomeoxidoreductase protein5e-0652.4
NC_019892:7223372:7240498724049872415621065Singulisphaera acidiphila DSM 18658 chromosome, complete genomedehydrogenase5e-0652.4
NC_009328:2083386:2133778213377821348571080Geobacillus thermodenitrificans NG80-2 chromosome, complete genomedehydrogenases and related proteins6e-0652.4
NC_013850:3340882:3356826335682633578331008Klebsiella variicola At-22 chromosome, complete genomeoxidoreductase domain protein6e-0652.4
NC_016641:2225779:2241058224105822421341077Paenibacillus terrae HPL-003 chromosome, complete genomeoxidoreductase domain-containing protein8e-0651.6