Pre_GI: BLASTP Hits

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Query: NC_003155:5443230:5457668 Streptomyces avermitilis MA-4680, complete genome

Start: 5457668, End: 5459101, Length: 1434

Host Lineage: Streptomyces avermitilis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (ATCC 31267) was isolated and characterized in 1978 by R. Burg and colleagues from a soil sample collected in Shizuoka Prefecture, Japan. Antibiotic-producing bacterium. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This organism is a well known producer of the anti-parasitic agent avermectin which is widely used to rid livestock of worm and insect infestations and to protect large numbers of people from river blindness in sub-Saharan Africa.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:8581000:8588980858898085905901611Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-47189
NC_008595:3914463:3917497391749739189361440Mycobacterium avium 104, complete genomeintegrase/recombinase4e-42172
NC_014168:1963129:1980871198087119823011431Segniliparus rotundus DSM 44985 chromosome, complete genomeresolvase domain-containing protein8e-39161
NC_007777:4892150:4926107492610749274051299Frankia sp. CcI3, complete genomeRecombinase1e-37157
NC_003888:4314389:4332160433216043336471488Streptomyces coelicolor A3(2), complete genomeintegrase /recombinase7e-37155
NC_017904:4742775:4779594477959447809251332Mycobacterium sp. MOTT36Y chromosome, complete genomerecombinase2e-36154
NC_014151:657382:6626926626926640771386Cellulomonas flavigena DSM 20109 chromosome, complete genomeResolvase domain protein6e-35149
NC_014151:1373937:1381285138128513826881404Cellulomonas flavigena DSM 20109 chromosome, complete genomeResolvase domain protein7e-33142
NC_007777:3000941:3014471301447130157091239Frankia sp. CcI3, complete genomeRecombinase1e-31138
NC_008726:1533727:1537760153776015391631404Mycobacterium vanbaalenii PYR-1, complete genomeRecombinase2e-31137
NC_009953:1364500:1375587137558713772631677Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein9e-31135
NC_012490:2067246:2073458207345820748131356Rhodococcus erythropolis PR4, complete genomerecombinase5e-30132
NC_003155:6667928:6710346671034667118481503Streptomyces avermitilis MA-4680, complete genomeintegrase/recombinase2e-29130
NC_009480:2580429:2587139258713925888421704Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative integrase/recombinase1e-28128
NC_015957:1070500:1070592107059210720371446Streptomyces violaceusniger Tu 4113 chromosome, complete genomeResolvase domain-containing protein1e-27125
NC_008699:1132790:1150783115078311521801398Nocardioides sp. JS614, complete genomeRecombinase2e-27124
NC_010617:988758:1005896100589610072811386Kocuria rhizophila DC2201, complete genomeputative recombinase2e-27124
NC_013757:1212308:1212308121230812136901383Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein2e-27124
NC_013169:805124:8088908088908104791590Kytococcus sedentarius DSM 20547, complete genomesite-specific recombinase, DNA invertase Pin7e-27122
NC_013757:3753241:3755341375534137567951455Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein1e-26121
NC_016582:5393568:5409756540975654111441389Streptomyces bingchenggensis BCW-1 chromosome, complete genomerecombinase5e-25116
NC_013929:5927935:5933764593376459352151452Streptomyces scabiei 87.22 chromosome, complete genometransposase2e-24114
NC_008278:296526:3036833036833051191437Frankia alni ACN14a, complete genomeputative integrase/recombinase.1e-21104
NC_013169:2104597:2110419211041921117951377Kytococcus sedentarius DSM 20547, complete genomesite-specific recombinase, DNA invertase Pin2e-20101
NC_008278:3025899:3036981303698130384171437Frankia alni ACN14a, complete genomehypothetical protein4e-2099.8
NC_007777:2749422:2749992274999227514851494Frankia sp. CcI3, complete genomeRecombinase8e-2098.6
NC_013729:5982000:5988854598885459902331380Kribbella flavida DSM 17836, complete genomeRecombinase1e-1998.6
NC_016109:4485925:4514314451431445157471434Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1998.6
NC_019673:2733327:2745910274591027475171608Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1997.4
NC_007777:4892150:4894548489454848955551008Frankia sp. CcI3, complete genomehypothetical protein3e-1893.6
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein3e-1687
NC_007777:461500:4646564646564662241569Frankia sp. CcI3, complete genomeRecombinase3e-1687
NC_013165:2240377:2265193226519322668121620Slackia heliotrinireducens DSM 20476, complete genomesite-specific recombinase, DNA invertase Pin3e-1686.7
NC_008278:3169500:3172236317223631737441509Frankia alni ACN14a, complete genomehypothetical protein8e-1582
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein3e-1480.1
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein3e-1480.1
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision5e-1479.7
NC_016048:522637:5403145403145418341521Oscillibacter valericigenes Sjm18-20, complete genomeputative recombinase5e-1479.3
NC_008023:1070986:1092958109295810948891932Streptococcus pyogenes MGAS2096, complete genomeSite-specific recombinase2e-1377.4
NC_009454:136468:1560681560681575431476Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-1377
NC_015385:2050648:2070407207040720719181512Treponema succinifaciens DSM 2489 chromosome, complete genomeResolvase domain protein8e-1375.5
NC_013165:2240377:2248647224864722503561710Slackia heliotrinireducens DSM 20476, complete genomesite-specific recombinase, DNA invertase Pin1e-1274.7
NC_014365:2037506:2051634205163420532201587Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein2e-1274.3
NC_008576:3307297:3314177331417733155141338Magnetococcus sp. MC-1, complete genomeResolvase, N-terminal domain3e-1273.9
NC_014034:2899120:2911608291160829129331326Rhodobacter capsulatus SB1003 chromosome, complete genomeresolvase family protein3e-1273.6
NC_008686:2080770:2081476208147620828011326Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase4e-1273.2
NC_004757:2730057:2780172278017227815271356Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase6e-1272.8
NC_014366:2826575:2833647283364728350021356Gamma proteobacterium HdN1, complete genomePredicted site-specific recombinase5e-1272.8
NC_003295:921256:9375829375829389641383Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RECOMBINASE PROTEIN5e-1272.8
NC_007645:5801295:5813910581391058152651356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase5e-1272.8
NC_007645:5724000:5743484574348457448391356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase9e-1272
NC_017904:2724941:2741824274182427432421419Mycobacterium sp. MOTT36Y chromosome, complete genomephage Integrase1e-1171.6
NC_013205:526281:5333245333245347511428Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Resolvase domain protein2e-1171.2
NC_013315:2059007:2059007205900720606051599Clostridium difficile CD196 chromosome, complete genomesite-specific recombinases1e-1171.2
NC_017179:2067015:2067015206701520686131599Clostridium difficile BI1, complete genomesite-specific recombinases1e-1171.2
NC_015684:3340519:3345276334527633465831308Oligotropha carboxidovorans OM5 chromosome, complete genomesite-specific recombinases/DNA1e-1171.2
NC_011386:763111:7778747778747791811308Oligotropha carboxidovorans OM5, complete genomeresolvase1e-1171.2
NC_020387:1257163:1279079127907912807341656Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, resolvase family2e-1170.9
NC_014307:233045:2447352447352460751341Ralstonia solanacearum CFBP2957 chromosome, complete genomesite-specific integrase protein2e-1170.9
NC_007645:6500059:6534682653468265362021521Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase4e-1169.7
NC_010943:1938136:1942507194250719438771371Stenotrophomonas maltophilia K279a, complete genomeputative recombinase/resolvase8e-1168.9
NC_013440:3813132:3838534383853438401111578Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein1e-1068.2
NC_009012:3823879:10410417231620Clostridium thermocellum ATCC 27405, complete genomeRecombinase1e-1068.2
NC_009012:1:10410417231620Clostridium thermocellum ATCC 27405, complete genomeRecombinase1e-1068.2
NC_016048:2873669:2897714289771428993811668Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-1067.4
NC_003295:3421520:3430395343039534317831389Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RESOLVASE PROTEIN2e-1067.4
NC_014311:198542:2098252098252112131389Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific resolvase protein3e-1067
NC_015422:2078618:2093031209303120944101380Alicycliphilus denitrificans K601 chromosome, complete genomeresolvase domain-containing protein3e-1067
NC_009706:3882500:3892814389281438943881575Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-1066.6
NC_011837:3814000:3824317382431738258911575Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-1066.6
NC_012491:3736167:3770304377030437719441641Brevibacillus brevis NBRC 100599, complete genomeputative integrase4e-1066.6
NC_009256:3601080:3609737360973736111851449Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein3e-1066.6
NC_013440:1317982:1320107132010713217111605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein5e-1066.2
NC_011837:3272752:3294545329454532962001656Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1065.9
NC_012416:1079661:1087609108760910891021494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family7e-1065.9
NC_012416:573202:5811505811505826431494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family7e-1065.9
NC_014393:2771774:2797930279793027996571728Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain9e-1065.5
NC_008609:251608:2686712686712701731503Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain9e-1065.5
NC_013440:1580802:1592997159299715946011605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein8e-1065.5
NC_009495:2479465:2521384252138425230031620Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeresolvase8e-1065.5
NC_010981:425387:4447164447164462031488Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family8e-1065.5
NC_010981:314745:3200063200063214871482Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family7e-1065.5
NC_013440:1131376:1154285115428511558891605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein1e-0965.1
NC_002978:618723:6266506266506281191470Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW5, site-specific recombinase, resolvase family1e-0965.1
NC_014365:2888897:2900319290031929018781560Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein2e-0964.7
NC_013521:345308:3614883614883627681281Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase, DNA invertase Pin1e-0964.7
NC_016026:1969766:1975530197553019771401611Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeresolvase, N terminal domain-containing protein1e-0964.7
NC_009706:2925000:293099329309932931637645Clostridium kluyveri DSM 555 chromosome, complete genomerecombinase1e-0964.7
NC_011837:2856500:286249528624952863139645Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0964.7
NC_013722:2810721:2842626284262628440141389Xanthomonas albilineans, complete genomeputative site-specific integrase protein2e-0964.3
NC_015977:2309873:2331366233136623330421677Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase2e-0963.9
NC_010981:314745:3593593593593606571299Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family2e-0963.9
NC_017190:1465079:1512520151252015142291710Bacillus amyloliquefaciens LL3 chromosome, complete genomeresolvase domain-containing protein3e-0963.9
NC_012781:2552723:2577962257796225796321671Eubacterium rectale ATCC 33656, complete genomecassette chromosome recombinase B3e-0963.5
NC_013316:2033906:2085969208596920876391671Clostridium difficile R20291, complete genomehypothetical protein3e-0963.5
NC_012781:700226:7191277191277207971671Eubacterium rectale ATCC 33656, complete genomecassette chromosome recombinase B3e-0963.5
NC_004461:1:4244142441440691629Staphylococcus epidermidis ATCC 12228, complete genomecassette chromosome recombinase B3e-0963.5
NC_013316:2033906:2066666206666620683181653Clostridium difficile R20291, complete genomehypothetical protein5e-0962.8
NC_013757:2046000:2048966204896620504771512Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein7e-0962.4
NC_008347:174000:1810061810061826431638Maricaulis maris MCS10, complete genomeRecombinase8e-0962.4
NC_013890:1142500:1157418115741811591121695Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein1e-0862
NC_016048:4163225:4188450418845041900241575Oscillibacter valericigenes Sjm18-20, complete genomeputative recombinase1e-0862
NC_014365:2843126:2857047285704728586061560Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein9e-0962
NC_013890:1142500:1168802116880211704541653Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein1e-0861.6
NC_013172:2877722:2898713289871329002481536Brachybacterium faecium DSM 4810, complete genomesite-specific recombinase, DNA invertase Pin2e-0861.2
NC_017068:2661419:2688876268887626902761401Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage integrase1e-0861.2
NC_007356:1165760:1165760116576011674271668Dehalococcoides sp. CBDB1, complete genomeprobable site-specific recombinase1e-0861.2
NC_014910:1912552:1921502192150219228811380Alicycliphilus denitrificans BC chromosome, complete genomeresolvase domain protein5e-0859.7
NC_010814:294394:3073493073493088511503Geobacter lovleyi SZ, complete genomeResolvase domain5e-0859.7
NC_011837:3226500:3230426323042632320781653Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-0859.3
NC_009706:3291330:3298924329892433005761653Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-0859.3
NC_017082:532000:5446575446575458981242Bradyrhizobium sp. S23321, complete genomehypothetical protein6e-0859.3
NC_018876:587094:596638596638597261624Methanolobus psychrophilus R15 chromosome, complete genomeputative DNA-invertase (Site-specific recombinase)6e-0859.3
NC_016782:56500:6956369563710651503Corynebacterium diphtheriae 241 chromosome, complete genomeputative DNA recombinase8e-0858.9
NC_016786:54000:6956269562710641503Corynebacterium diphtheriae HC01 chromosome, complete genomeputative DNA recombinase8e-0858.9
NC_014376:3399366:3414149341414934157231575Clostridium saccharolyticum WM1 chromosome, complete genomeResolvase domain protein8e-0858.9
NC_012563:2680246:2695798269579826973361539Clostridium botulinum A2 str. Kyoto, complete genomeresolvase family protein1e-0758.2
NC_013552:1187299:1189131118913111907831653Dehalococcoides sp. VS, complete genomessrA integrase2e-0757.8
NC_012563:2597934:2611695261169526133171623Clostridium botulinum A2 str. Kyoto, complete genomeresolvase2e-0757.8
NC_020387:1257163:1258468125846812601351668Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, resolvase family2e-0757.8
NC_014393:4775452:4783933478393347854381506Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain2e-0757.4
NC_009972:606393:6089936089936103811389Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome2e-0757.4
NC_014246:1402500:1412236141223614137981563Mobiluncus curtisii ATCC 43063 chromosome, complete genomesite-specific recombinase5e-0756.2
NC_014828:1019533:1033581103358110350531473Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain5e-0756.2
NC_011365:1171536:1204634120463412063221689Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeResolvase domain7e-0755.8
NC_016947:4500329:4506220450622045077461527Mycobacterium intracellulare MOTT-02 chromosome, complete genomephague integrase1e-0655.5
NC_013890:1142500:1143359114335911450261668Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein9e-0755.5
NC_017297:2531750:2570151257015125713741224Clostridium botulinum F str. 230613 chromosome, complete genome1e-0655.1
NC_016027:2446806:2457542245754224592301689Gluconacetobacter xylinus NBRC 3288, complete genomeDNA resolvase1e-0655.1
NC_007644:1603696:1603696160369616053361641Moorella thermoacetica ATCC 39073, complete genomeResolvase-like1e-0655.1
NC_015660:3174424:3174424317442431759981575Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein2e-0654.7
NC_009699:2552195:2570011257001125715611551Clostridium botulinum F str. Langeland chromosome, complete genomeresolvase family protein2e-0654.7
NC_013855:964000:9696279696279713031677Azospirillum sp. B510 plasmid pAB510a, complete sequencerecombinase2e-0654.7
NC_017068:1480148:1480148148014814823132166Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA recombinase2e-0654.3
NC_008530:1454118:1480338148033814819991662Lactobacillus gasseri ATCC 33323, complete genomeSite-specific recombinase, DNA invertase Pin related protein2e-0654.3
NC_009668:445134:4623194623194639741656Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencerecombinase2e-0654.3
NC_009720:1248866:126996712699671270605639Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein2e-0654.3
NC_009720:900884:9144479144479164351989Xanthobacter autotrophicus Py2, complete genomerecombinase2e-0654.3
NC_015660:1076159:108500710850071085873867Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein2e-0653.9
NC_013316:2033906:2068845206884520705181674Clostridium difficile R20291, complete genomehypothetical protein2e-0653.9
NC_015660:1076159:1079596107959610811491554Geobacillus thermoglucosidasius C56-YS93 chromosome, completeRecombinase3e-0653.9
NC_017337:1107930:1107930110793011093151386Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage integrase3e-0653.9
NC_003911:1265972:1283506128350612849901485Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, resolvase family3e-0653.5
NC_009720:5046861:5053666505366650554201755Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein3e-0653.5
NC_014614:2643203:2648799264879926504481650Clostridium sticklandii, complete genomesite-specific DNA recombinase (modular protein)5e-0653.1
NC_007296:1073784:1081126108112610828051680Streptococcus pyogenes MGAS6180, complete genomesite-specific recombinase6e-0652.8
NC_015312:848403:8526538526538543411689Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeResolvase domain-containing protein6e-0652.8
NC_003888:4750489:4754366475436647560151650Streptomyces coelicolor A3(2), complete genomeintegrase6e-0652.8
NC_014659:3654979:3670491367049136723291839Rhodococcus equi 103S, complete genomephague integrase7e-0652.4
NC_013739:3006719:3019445301944530209741530Conexibacter woesei DSM 14684, complete genomeResolvase domain protein7e-0652.4
NC_010125:1051735:107408210740821074840759Gluconacetobacter diazotrophicus PAl 5, complete genome8e-0652.4
NC_017351:643674:6436746436746450501377Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeresolvase, N terminal domain protein9e-0652