Pre_GI: BLASTP Hits

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Query: NC_003155:5443230:5453950 Streptomyces avermitilis MA-4680, complete genome

Start: 5453950, End: 5454459, Length: 510

Host Lineage: Streptomyces avermitilis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (ATCC 31267) was isolated and characterized in 1978 by R. Burg and colleagues from a soil sample collected in Shizuoka Prefecture, Japan. Antibiotic-producing bacterium. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This organism is a well known producer of the anti-parasitic agent avermectin which is widely used to rid livestock of worm and insect infestations and to protect large numbers of people from river blindness in sub-Saharan Africa.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:4807910:481162748116274812169543Streptomyces scabiei 87.22 chromosome, complete genomephosphoribosyltransferase3e-88323
NC_015957:196000:205076205076205594519Streptomyces violaceusniger Tu 4113 chromosome, complete genomephosphoribosyltransferase4e-84310
NC_010572:4024810:402994640299464030446501Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative purine phosphoribosyltransferase4e-81300
NC_018750:3741581:375639137563913756888498Streptomyces venezuelae ATCC 10712, complete genomeputative purine phosphoribosyltransferase5e-81299
NC_015953:3456535:346496434649643465464501Streptomyces sp. SirexAA-E chromosome, complete genomephosphoribosyltransferase2e-75281
NC_016111:3486000:349410234941023494608507Streptomyces cattleya NRRL 8057, complete genomephosphoribosyltransferase9e-67252
NC_012590:37697:716167161672131516Corynebacterium aurimucosum ATCC 700975, complete genomeputative purine phosphoribosyltransferase5e-41166
NC_016782:2058967:206289620628962063396501Corynebacterium diphtheriae 241 chromosome, complete genomeputative purine phosphoribosyltransferase6e-40163
NC_016786:2059564:206349320634932063993501Corynebacterium diphtheriae HC01 chromosome, complete genomeputative purine phosphoribosyltransferase6e-40163
NC_016788:2115428:211635621163562116856501Corynebacterium diphtheriae HC04 chromosome, complete genomeputative purine phosphoribosyltransferase6e-40163
NC_016790:2027332:202826020282602028760501Corynebacterium diphtheriae VA01 chromosome, complete genomeputative purine phosphoribosyltransferase6e-40163
NC_002935:2103677:210760621076062108106501Corynebacterium diphtheriae NCTC 13129, complete genomePutative purine phosphoribosyltransferase4e-40163
NC_017317:2149794:215395821539582154461504Corynebacterium ulcerans 809 chromosome, complete genomepurine phosphoribosyltransferase8e-40162
NC_015683:2249949:225411422541142254617504Corynebacterium ulcerans BR-AD22 chromosome, complete genomepurine phosphoribosyltransferase8e-40162
NC_016512:679688:679688679688680191504Propionibacterium acnes TypeIA2 P.acn17 chromosome, completephosphoribosyl transferase domain protein8e-34142
NC_016511:678582:680303680303680806504Propionibacterium acnes TypeIA2 P.acn31 chromosome, completephosphoribosyl transferase domain protein8e-34142
NC_015474:538544:547788547788548249462Pyrococcus sp. NA2 chromosome, complete genomepurine phosphoribosyltransferase related protein1e-1892
NC_016051:1849905:185871618587161859180465Thermococcus sp. AM4 chromosome, complete genomexanthine-guanine phosphoribosyltransferase4e-1890.9
NC_003413:37233:455524555246013462Pyrococcus furiosus DSM 3638, complete genomexanthine-guanine phosphoribosyltransferase3e-1890.9
NC_015680:1275252:128901212890121289473462Pyrococcus yayanosii CH1 chromosome, complete genomepurine phosphoribosyltransferase-like protein4e-1890.5
NC_014804:1898419:192064219206421921103462Thermococcus barophilus MP chromosome, complete genomexanthine-guanine phosphoribosyltransferase3e-1787.8
NC_015151:1403500:141507914150791415642564Vulcanisaeta moutnovskia 768-28 chromosome, complete genomephosphoribosyltransferase4e-1787.4
NC_019791:1272850:128203012820301282791762Caldisphaera lagunensis DSM 15908 chromosome, complete genomephosphoribosyltransferase2e-1684.7
NC_011529:1685834:168889216888921689356465Thermococcus onnurineus NA1, complete genomexanthine/guanine phosphoribosyltransferase2e-1684.7
NC_016885:118182:136534136534137076543Pyrobaculum oguniense TE7 chromosome, complete genomeputative phosphoribosyltransferase2e-1374.7
NC_009776:617532:634120634120634776657Ignicoccus hospitalis KIN4/I, complete genomephosphoribosyltransferase2e-1271.6
NC_012726:115500:135014135014135646633Sulfolobus islandicus M.16.4 chromosome, complete genomephosphoribosyltransferase1e-1169.3
NC_014205:17445:294712947130088618Staphylothermus hellenicus DSM 12710 chromosome, complete genomephosphoribosyltransferase5e-1167
NC_014160:719408:740813740813741427615Thermosphaera aggregans DSM 11486 chromosome, complete genomephosphoribosyltransferase5e-1063.5
NC_013741:838243:847266847266847925660Archaeoglobus profundus DSM 5631, complete genomephosphoribosyltransferase5e-1063.5
NC_008698:560529:576595576595577365771Thermofilum pendens Hrk 5, complete genomephosphoribosyltransferase6e-1063.5
NC_016885:276000:285994285994286656663Pyrobaculum oguniense TE7 chromosome, complete genomeputative phosphoribosyltransferase2e-0961.6
NC_014364:894373:920265920265920798534Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephosphoribosyltransferase5e-0857
NC_017954:934616:964241964241964888648Thermogladius cellulolyticus 1633 chromosome, complete genomephosphoribosyltransferase6e-0856.6
NC_014217:2172464:218391721839172184423507Starkeya novella DSM 506 chromosome, complete genomeXanthine phosphoribosyltransferase7e-0856.6
NC_011420:2803196:281687028168702817355486Rhodospirillum centenum SW, complete genomexanthine phosphoribosyltransferase, putative1e-0652.8