Pre_GI: BLASTN Hits

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Query: NC_002973:1846000 Listeria monocytogenes str. 4b F2365, complete genome

Start: 1846000, End: 1869648, Length: 23649

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain was isolated in 1985 in California, USA, during an outbreak of listeriosis among patients with AIDS. The strain is of serotype 4b and was isolated from a cheese product that caused the outbreak. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011772:3821917*3821917384006218146Bacillus cereus G9842, complete genome2e-31145BLASTN svgBLASTP svg
NC_003909:3606177*3606177364959943423Bacillus cereus ATCC 10987, complete genome9e-31143BLASTN svgBLASTP svg
NC_006274:3736703*3736703375516418462Bacillus cereus E33L, complete genome6e-29137BLASTN svgBLASTP svg
NC_005945:3636321*3636321368007243752Bacillus anthracis str. Sterne, complete genome2e-28135BLASTN svgBLASTP svg
NC_005957:3665657*3665657369792532269Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-28135BLASTN svgBLASTP svg
NC_007530:3616828*3616828367637859551Bacillus anthracis str. 'Ames Ancestor', complete genome2e-28135BLASTN svgBLASTP svg
NC_008600:3686135*3686135370410517971Bacillus thuringiensis str. Al Hakam, complete genome2e-28135BLASTN svgBLASTP svg
NC_012472:3705500*3705500372211116612Bacillus cereus 03BB102, complete genome2e-28135BLASTN svgBLASTP svg
NC_014335:3589726*3589726362559935874Bacillus cereus biovar anthracis str. CI chromosome, complete2e-28135BLASTN svgBLASTP svg
NC_003997:3617000*3617000367460757608Bacillus anthracis str. Ames, complete genome2e-28135BLASTN svgBLASTP svg
UCMB5137:1159520*1159520117958420065Bacillus atrophaeus UCMB-51372e-22115BLASTN svgBLASTP svg
NC_010184:3713359*3713359373609922741Bacillus weihenstephanensis KBAB4, complete genome8e-22113BLASTN svgBLASTP svg
NC_010382:1607013*1607013163059923587Lysinibacillus sphaericus C3-41, complete genome3e-18101BLASTN svgBLASTP svg
NC_014103:4059905*4059905407793618032Bacillus megaterium DSM319 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009848:1542978*1542978156391120934Bacillus pumilus SAFR-032, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012121:837586*83758685955321968Staphylococcus carnosus subsp. carnosus TM300, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_020164:1590221*1590221161409923879Staphylococcus warneri SG1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015391:1013608*1013608103374320136Carnobacterium sp. 17-4 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013893:17239391723939174613522197Staphylococcus lugdunensis HKU09-01 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009004:2477220*2477220250009922880Lactococcus lactis subsp. cremoris MG1363, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004193:15585511558551157759919049Oceanobacillus iheyensis HTE831, complete genome2e-0765.9BLASTN svgBLASTP svg