Pre_GI: BLASTN Hits

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Query: NC_002952:884500 Staphylococcus aureus subsp. aureus MRSA252, complete genome

Start: 884500, End: 903895, Length: 19396

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hospital-acquired strain isolated in the United Kingdom, representative of the methicillin-resistant (MRSA) strains. It is one of the two major MRSA strains found in British hospitals in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,3e-1591.7BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete6e-1383.8BLASTN svgBLASTP svg
CP002207:113466634666Bacillus atrophaeus 1942, complete genome6e-1383.8BLASTN svgBLASTP svg
UCMB5137:18349991834999185304118043Bacillus atrophaeus UCMB-51379e-0660BLASTN svgBLASTP svg
UCMB5137:1*13837038370Bacillus atrophaeus UCMB-51371e-1799.6BLASTN svgBLASTP svg
NC_014829:72200072200074017718178Bacillus cellulosilyticus DSM 2522 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_013791:1082951*1082951110442521475Bacillus pseudofirmus OF4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021171:2697398*2697398271566018263Bacillus sp. 1NLA3E, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_021171:16619231661923168490422982Bacillus sp. 1NLA3E, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete6e-1693.7BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete1e-1799.6BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014614:2359046*2359046238727828233Clostridium sticklandii, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020207:18720001872000190209930100Enterococcus faecium NRRL B-2354, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome3e-18101BLASTN svgBLASTP svg
NC_012914:33675033675036344026691Paenibacillus sp. JDR-2, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007622:56750056750058887821379Staphylococcus aureus RF122, complete genome2e-90341BLASTN svgBLASTP svg
NC_002951:49535495357109921565Staphylococcus aureus subsp. aureus COL, complete genome1e-32149BLASTN svgBLASTP svg
NC_002951:62346162346164703323573Staphylococcus aureus subsp. aureus COL, complete genome2e-86327BLASTN svgBLASTP svg
NC_002952:61046261046263067520214Staphylococcus aureus subsp. aureus MRSA252, complete genome1e-88335BLASTN svgBLASTP svg
NC_002953:58843758843761403425598Staphylococcus aureus subsp. aureus MSSA476, complete genome2e-87331BLASTN svgBLASTP svg
NC_002953:27730002773000279475321754Staphylococcus aureus subsp. aureus MSSA476, complete genome6e-44186BLASTN svgBLASTP svg
NC_002758:62200062200064387421875Staphylococcus aureus subsp. aureus Mu50, complete genome4e-85323BLASTN svgBLASTP svg
NC_003923:27946862794686281805223367Staphylococcus aureus subsp. aureus MW2, complete genome6e-44186BLASTN svgBLASTP svg
NC_003923:59100059100061534324344Staphylococcus aureus subsp. aureus MW2, complete genome2e-86327BLASTN svgBLASTP svg
NC_002745:84084884084886459823751Staphylococcus aureus subsp. aureus N315, complete genome08958BLASTN svgBLASTP svg
NC_002745:59794759794761962721681Staphylococcus aureus subsp. aureus N315, complete genome4e-85323BLASTN svgBLASTP svg
NC_007795:54178354178356019718415Staphylococcus aureus subsp. aureus NCTC 8325, complete genome2e-80307BLASTN svgBLASTP svg
NC_007793:60650060650062556519066Staphylococcus aureus subsp. aureus USA300, complete genome2e-86327BLASTN svgBLASTP svg
NC_010079:60700060700062610719108Staphylococcus aureus subsp. aureus USA300_TCH1516, complete2e-86327BLASTN svgBLASTP svg
NC_002976:15407941540794156113820345Staphylococcus epidermidis RP62A, complete genome9e-83315BLASTN svgBLASTP svg
NC_007168:24153612415361243618320823Staphylococcus haemolyticus JCSC1435, complete genome3e-55224BLASTN svgBLASTP svg
NC_020164:23293402329340234976120422Staphylococcus warneri SG1, complete genome4e-94353BLASTN svgBLASTP svg