Pre_GI: BLASTN Hits

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Query: NC_002952:1349006 Staphylococcus aureus subsp. aureus MRSA252, complete genome

Start: 1349006, End: 1372099, Length: 23094

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hospital-acquired strain isolated in the United Kingdom, representative of the methicillin-resistant (MRSA) strains. It is one of the two major MRSA strains found in British hospitals in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014551:18720001872000190259930600Bacillus amyloliquefaciens DSM 7, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009725:17872621787262182535038089Bacillus amyloliquefaciens FZB42, complete genome3e-21111BLASTN svgBLASTP svg
NC_020272:2077795*2077795210909931305Bacillus amyloliquefaciens IT-45, complete genome8e-19103BLASTN svgBLASTP svg
NC_019842:18470811847081187209925019Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,3e-21111BLASTN svgBLASTP svg
NC_020410:1781884*1781884181093329050Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete8e-19103BLASTN svgBLASTP svg
UCMB5137:1375622*1375622139480219181Bacillus atrophaeus UCMB-51378e-22113BLASTN svgBLASTP svg
NC_006270:19369521936952195554418593Bacillus licheniformis ATCC 14580, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006322:19328471932847195639223546Bacillus licheniformis ATCC 14580, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014479:18314041831404185885427451Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete5e-20107BLASTN svgBLASTP svg
NC_016047:19783121978312200437026059Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete1e-20109BLASTN svgBLASTP svg
NC_000964:18733981873398189925825861Bacillus subtilis subsp. subtilis str. 168, complete genome4e-36161BLASTN svgBLASTP svg
NC_020244:18758341875834191709041257Bacillus subtilis XF-1, complete genome2e-35159BLASTN svgBLASTP svg
NC_010723:10143341014334103372419391Clostridium botulinum E3 str. Alaska E43, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020291:48158534815853483840422552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013656:25057832505783252840822626Lactococcus lactis subsp. lactis KF147, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002952:2390668*2390668241976729100Staphylococcus aureus subsp. aureus MRSA252, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007795:19220001922000197572353724Staphylococcus aureus subsp. aureus NCTC 8325, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007793:16330801633080165159418515Staphylococcus aureus subsp. aureus USA300, complete genome06996BLASTN svgBLASTP svg
NC_013893:23104952310495233660526111Staphylococcus lugdunensis HKU09-01 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_006449:1572000*1572000159415422155Streptococcus thermophilus CNRZ1066, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006448:1568000*1568000159009922100Streptococcus thermophilus LMG 18311, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011653:1226035*1226035125859932565Thermosipho africanus TCF52B, complete genome2e-1075.8BLASTN svgBLASTP svg