Pre_GI: BLASTN Hits

Some Help

Query: NC_002945:1621765 Mycobacterium bovis AF2122/97, complete genome

Start: 1621765, End: 1648262, Length: 26498

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013205:2610956*2610956266117350218Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,3e-0661.9BLASTN svgBLASTP svg
NC_013851:85939685939688482325428Allochromatium vinosum DSM 180 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013855:1268424*1268424129242324000Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_021150:16273471627347165194824602Azotobacter vinelandii CA6, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012560:16273341627334164585618523Azotobacter vinelandii DJ, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-1591.7BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_002935:1315019*1315019137072155703Corynebacterium diphtheriae NCTC 13129, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014329:11696741169674119345823785Corynebacterium pseudotuberculosis FRC41 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_009952:1680682*1680682171856437883Dinoroseobacter shibae DFL 12, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015954:2764919*2764919280819843280Halophilic archaeon DL31 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015387:1898496*1898496191959921104Marinithermus hydrothermalis DSM 14884 chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_015387:10029551002955103001227058Marinithermus hydrothermalis DSM 14884 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002945:27578212757821278170823888Mycobacterium bovis AF2122/97, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008769:27548282754828277870723880Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012207:27475992747599277148023882Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015848:16475231647523167029122769Mycobacterium canettii CIPT 140010059, complete genome012650BLASTN svgBLASTP svg
NC_015848:28591452859145288297223828Mycobacterium canettii CIPT 140010059, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019950:28306822830682285444023759Mycobacterium canettii CIPT 140060008 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020133:90200090200092552523526Mycobacterium liflandii 128FXT, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_020133:57106615710661573224421584Mycobacterium liflandii 128FXT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020133:50205005020500504274122242Mycobacterium liflandii 128FXT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome02198BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020133:14439341443934146609922166Mycobacterium liflandii 128FXT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010612:61131556113155613265419500Mycobacterium marinum M, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010612:54030005403000542141218413Mycobacterium marinum M, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010612:95778695778698186224077Mycobacterium marinum M, complete genome4e-18101BLASTN svgBLASTP svg
NC_002755:27880002788000281039922400Mycobacterium tuberculosis CDC1551, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009565:16297801629780165615326374Mycobacterium tuberculosis F11, complete genome014390BLASTN svgBLASTP svg
NC_009565:28060002806000282822922230Mycobacterium tuberculosis F11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009525:28029872802987282687923893Mycobacterium tuberculosis H37Ra, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009525:39335673933567395892925363Mycobacterium tuberculosis H37Ra, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000962:27910192791019281491123893Mycobacterium tuberculosis H37Rv, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018681:56279405627940567856250623Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018524:57484215748421577627827858Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome8e-47196BLASTN svgBLASTP svg
NC_015690:11093351109335116959960265Paenibacillus mucilaginosus KNP414 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012522:75960397596039763616240124Rhodococcus opacus B4, complete genome4e-144519BLASTN svgBLASTP svg
NC_013521:2193203*2193203221998826786Sanguibacter keddieii DSM 10542, complete genome9e-19103BLASTN svgBLASTP svg
NC_006834:14141131414113144373429622Xanthomonas oryzae pv. oryzae KACC10331, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007705:13886071388607141722428618Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010717:39334853933485396259929115Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-1797.6BLASTN svgBLASTP svg