Pre_GI: BLASTP Hits

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Query: NC_002608:64901:68245 Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence

Start: 68245, End: 68682, Length: 438

Host Lineage: Halobacterium; Halobacterium; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: Chemoheterotrophic obligate extreme halophilic archeon. This microbe (strain ATCC 700922) is an obligately halophilic archeon that has adapted to growth under conditions of extremely high salinity. Motility is via tufts of polar flagella and intracellular gas vesicles are used for buoyancy. This organism grow aerobically and its ease of culturing combined with the availability of established methods of genetic manipulation in the laboratory make it an ideal model organism for study of the archaea.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012028:336864:351934351934352368435Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomedeoxyribonuclease/rho motif-related TRAM5e-40162
NC_013745:177700:192291192291192695405Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completecyclic nucleotide-binding protein4e-26116
NC_019974:1115553:116729211672921167702411Natronococcus occultus SP4, complete genomeputative RNA-binding protein, contains TRAM domain9e-25112
NC_015658:371158:384229384229384684456Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceTRAM domain-containing protein1e-23108
NC_012030:400515:405096405096405512417Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completedeoxyribonuclease/rho motif-related TRAM2e-1994.4
NC_014299:82584:929049290493068165Halalkalicoccus jeotgali B3 plasmid 2, complete sequencehypothetical protein4e-1476.6
NC_015574:2145000:216754821675482167760213Methanobacterium sp. SWAN-1 chromosome, complete genomedeoxyribonuclease/rho motif-related TRAM9e-0958.9
NC_015216:328598:331167331167331367201Methanobacterium sp. AL-21 chromosome, complete genomedeoxyribonuclease/rho motif-related TRAM2e-0858.2
NC_015636:379000:402309402309402524216Methanothermococcus okinawensis IH1 chromosome, complete genomeTRAM domain-containing protein2e-0754.3
NC_007955:1523500:152403215240321524223192Methanococcoides burtonii DSM 6242, complete genomeRNA-binding protein2e-0754.3
NC_016051:1471782:147454514745451474760216Thermococcus sp. AM4 chromosome, complete genomeRNA-binding protein3e-0753.9
NC_013156:875975:893828893828894061234Methanocaldococcus fervens AG86, complete genomedeoxyribonuclease/rho motif-related TRAM6e-0753.1
NC_018876:587094:619456619456619647192Methanolobus psychrophilus R15 chromosome, complete genomeTRAM-domain protein6e-0752.8
NC_007955:1498777:150390215039021504510609Methanococcoides burtonii DSM 6242, complete genometranslation initiation factor aIF-2, beta subunit, putative6e-0752.8
NC_014253:431942:447977447977448180204Methanohalobium evestigatum Z-7303 chromosome, complete genomedeoxyribonuclease/rho motif-like TRAM protein7e-0752.8