Pre_GI: BLASTP Hits

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Query: NC_002505:1931750:1949718 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1949718, End: 1950704, Length: 987

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1978058:199602619960261997012987Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0639
NC_016445:1363831:142111914211191422105987Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0639
NC_012668:1688500:169680316968031697789987Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0639
NC_012582:2013515:203424020342402035226987Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0639
NC_009457:1444449:150282115028211503807987Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0639
NC_017270:1755552:178690317869031787889987Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein1e-178625
NC_017512:2087098:2109395210939521104471053Neisseria meningitidis WUE 2594, complete genomehypothetical protein4e-46185
NC_003116:93576:1158731158731169281056Neisseria meningitidis Z2491, complete genomehypothetical protein3e-46185
NC_014752:98117:9811798117991721056Neisseria lactamica ST-640, complete genomehypothetical protein8e-45181
NC_014752:98117:991819918199864684Neisseria lactamica ST-640, complete genomehypothetical protein1e-27124
NC_017512:2087098:210870321087032109386684Neisseria meningitidis WUE 2594, complete genomehypothetical protein2e-27123
NC_003116:93576:115181115181115864684Neisseria meningitidis Z2491, complete genomehypothetical protein2e-27123