Pre_GI: BLASTP Hits

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Query: NC_002505:1931750:1943306 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1943306, End: 1944457, Length: 1152

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:2013515:2027828202782820289791152Vibrio cholerae O395 chromosome chromosome I, complete sequenceeha protein, General secretion pathway protein A0755
NC_016944:1978058:1989614198961419907231110Vibrio cholerae IEC224 chromosome I, complete sequenceeha protein0726
NC_016445:1363831:1414707141470714158161110Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0726
NC_009457:1444449:1496409149640914975181110Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0726
NC_012668:1688500:1703161170316117042011041Vibrio cholerae MJ-1236 chromosome 1, complete sequencegeneral secretion pathway protein A0680
NC_018604:305957:329718329718330578861Brachyspira pilosicoli WesB complete genometype II secretory pathway, component ExeA1e-67256
NC_017243:58000:767277672777587861Brachyspira intermedia PWS/A chromosome, complete genometype II secretory pathway, component ExeA6e-61234
NC_011750:1978801:2006014200601420072071194Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-57223
NC_002927:3827211:3864510386451038656941185Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-51202
NC_014216:2027017:2028593202859320295971005Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeAAA ATPase3e-1273.2
NC_007517:2241104:2266711226671122678681158Geobacter metallireducens GS-15, complete genomeATPase4e-1272.8
NC_009483:2640403:2732430273243027336021173Geobacter uraniireducens Rf4 chromosome, complete genomeATPase AAA9e-1271.6
NC_019774:74131:807158071581686972Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceAAA ATPase4e-1169.7
NC_011769:820521:8276288276288288151188Desulfovibrio vulgaris str. 'Miyazaki F', complete genomesecretion ATPase, PEP-CTERM locus subfamily1e-1067.8
NC_013960:3379515:338417133841713385166996Nitrosococcus halophilus Nc4 chromosome, complete genomesecretion ATPase, PEP-CTERM locus subfamily4e-0962.8
NC_010524:3914880:3916740391674039192352496Leptothrix cholodnii SP-6, complete genomesecretion ATPase, PEP-CTERM locus subfamily7e-0962
NC_008789:1641774:1645072164507216461871116Halorhodospira halophila SL1, complete genomeAAA ATPase6e-0962
NC_008435:1215437:123744212374421238284843Rhodopseudomonas palustris BisA53, complete genomeAAA ATPase6e-0962
NC_014973:1767798:178322217832221784106885Geobacter sp. M18 chromosome, complete genomeAAA ATPase1e-0861.2
NC_020210:788639:805696805696806496801Geobacillus sp. GHH01, complete genomeATPase2e-0860.8
NC_006510:372826:388610388610389410801Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-0860.8
NC_016593:2447938:247397224739722474772801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein2e-0860.8
NC_016593:416661:431064431064431864801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein2e-0860.8
NC_007298:2568851:2589019258901925900951077Dechloromonas aromatica RCB, complete genomeATPas3e-0860.1
NC_016593:1814500:184006818400681840868801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein4e-0859.7
NC_008789:350650:371418371418372293876Halorhodospira halophila SL1, complete genomeAAA ATPase5e-0859.3
NC_020210:2133996:218424821842482185048801Geobacillus sp. GHH01, complete genomeAAA ATPase1e-0758.2
NC_006510:887545:897613897613898413801Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-0758.2
NC_020210:1704500:173031717303171731117801Geobacillus sp. GHH01, complete genomehypothetical protein1e-0757.8
NC_015942:1047576:106702610670261067997972Acidithiobacillus ferrivorans SS3 chromosome, complete genomeAAA ATPase2e-0757
NC_011146:1998981:2043420204342020445381119Geobacter bemidjiensis Bem, complete genomesecretion ATPase, PEP-CTERM locus subfamily3e-0756.6
NC_020210:788639:793670793670794470801Geobacillus sp. GHH01, complete genomehypothetical protein3e-0756.6
NC_003277:22257:3415534155351801026Salmonella typhimurium LT2 plasmid pSLT, complete sequencetype II secretion system protein4e-0756.2
NC_016861:22256:341483414835116969Salmonella enterica subsp. enterica serovar Typhimurium strphosphoribulokinase/uridine kinase family protein5e-0755.8
NC_010321:2276000:227885222788522279652801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA7e-0755.5
NC_014964:35862:543265432655126801Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeAAA ATPase9e-0755.1
NC_010321:35855:543195431955119801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA9e-0755.1
NC_020541:3156500:3218681321868132197451065Rhodanobacter sp. 2APBS1, complete genomeputative secretion ATPase, PEP-CTERM locus subfamily1e-0654.7
NC_016616:1336000:135596613559661356796831Dechlorosoma suillum PS chromosome, complete genometype II secretory pathway protein ExeA2e-0653.9
NC_006177:2883476:291682329168232917659837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein4e-0653.1
NC_006177:2398482:243411924341192434955837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein4e-0653.1
NC_006177:46745:682856828569121837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein4e-0652.8