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Query: NC_002505:1931750:1938739 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1938739, End: 1939779, Length: 1041

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1363831:1410140141014014111801041Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0663
NC_016944:1978058:1985047198504719860871041Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0662
NC_012582:2013515:2023261202326120243011041Vibrio cholerae O395 chromosome chromosome I, complete sequenceMu-like prophage FluMu protein gp420662
NC_009457:1444449:1491842149184214928821041Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0662
NC_012668:1688500:170780917078091708768960Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-173608
NC_000907:1568867:1583718158371815856131896Haemophilus influenzae Rd KW20, complete genomemonofunctional biosynthetic peptidoglycan transglycosylase9e-51201
NC_015424:1987964:2002670200267020055132844Aeromonas veronii B565 chromosome, complete genomephage tape measure protein2e-44179
NC_016002:1741109:1762392176239217655353144Pseudogulbenkiania sp. NH8B, complete genomephage tape measure protein2e-43176
NC_016002:2179969:2200743220074322038863144Pseudogulbenkiania sp. NH8B, complete genomephage tape measure protein2e-43176
NC_002937:2933000:2956426295642629579161491Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein2e-23110
NC_009662:455139:4628384628384671034266Nitratiruptor sp. SB155-2, complete genomehypothetical protein4e-22105
NC_016791:1341858:1354668135466813580933426Clostridium sp. BNL1100 chromosome, complete genometape measure domain protein5e-1892.4
NC_017045:99500:1088731088731130544182Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage tape measure protein1e-1273.9
NC_014738:2094000:2103624210362421078054182Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,phage tape measure protein1e-1273.9
NC_010002:5111665:5129112512911251339414830Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1170.9
NC_015520:595532:6146216146216179983378Mahella australiensis 50-1 BON chromosome, complete genomephage tape measure protein1e-1170.9
NC_014657:914071:9277869277869299632178Caldicellulosiruptor owensensis OL chromosome, complete genomephage tape measure protein7e-1168.6
NC_012491:3088500:3092380309238030942301851Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0859.7
NC_021182:3347076:3352858335285833554942637Clostridium pasteurianum BC1, complete genometape measure domain protein9e-0858.2
NC_014972:2771902:2789431278943127920492619Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein1e-0654.7
NC_015144:237467:2498202498202536533834Weeksella virosa DSM 16922 chromosome, complete genomehypothetical protein7e-0652