Pre_GI: BLASTN Hits

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Query: AP010958:2455052 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 2455052, End: 2473599, Length: 18548

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome014810BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome013070BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome012360BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome011740BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome011740BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome011740BLASTN svgBLASTP svg
NC_007946:21554542155454218077025317Escherichia coli UTI89, complete genome010170BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome010170BLASTN svgBLASTP svg
NC_008253:20567342056734207917122438Escherichia coli 536, complete genome010160BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome07029BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome06114BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome02829BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome02670BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome02442BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome01445BLASTN svgBLASTP svg
NC_008253:29650029650032229825799Escherichia coli 536, complete genome01403BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome01336BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome01334BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome01320BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome01150BLASTN svgBLASTP svg
NC_010498:11179381117938114953131594Escherichia coli SMS-3-5, complete genome0969BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome0872BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome0872BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome0872BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome0872BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0827BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome0773BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome0737BLASTN svgBLASTP svg
NC_004431:27986827986832229542428Escherichia coli CFT073, complete genome0704BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome4e-165589BLASTN svgBLASTP svg
NC_007608:970929709212311926028Shigella boydii Sb227 plasmid pSB4_227, complete sequence1e-162581BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome1e-162581BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome1e-162581BLASTN svgBLASTP svg
NC_010658:2529033*2529033255581226780Shigella boydii CDC 3083-94, complete genome1e-162581BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence1e-162581BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome2e-160573BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome1e-158567BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome2e-157563BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome4e-156559BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome1e-155557BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome8e-151541BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome8e-151541BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence8e-151541BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome8e-151541BLASTN svgBLASTP svg
NC_004741:24562972456297247959923303Shigella flexneri 2a str. 2457T, complete genome5e-109402BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome3e-104387BLASTN svgBLASTP svg
NC_008563:47393334739333476356524233Escherichia coli APEC O1, complete genome2e-102381BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome7e-102379BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome7e-102379BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome7e-102379BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-100375BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-95357BLASTN svgBLASTP svg
NC_014121:36275883627588367459947012Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-95357BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-95357BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-91343BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-82313BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome1e-78301BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome1e-78301BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome1e-78301BLASTN svgBLASTP svg
NC_012214:1117325*1117325114343626112Erwinia pyrifoliae Ep1/96, complete genome1e-78301BLASTN svgBLASTP svg
NC_015963:11717811717814980332626Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence2e-62248BLASTN svgBLASTP svg
NC_015663:4906652*4906652493024623595Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-60240BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome2e-59238BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome2e-59238BLASTN svgBLASTP svg
NC_021066:601029*60102962413023102Raoultella ornithinolytica B6, complete genome7e-59236BLASTN svgBLASTP svg
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome1e-57232BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str4e-57230BLASTN svgBLASTP svg
NC_013850:1753716*1753716178468730972Klebsiella variicola At-22 chromosome, complete genome3e-55224BLASTN svgBLASTP svg
NC_010694:10527221052722108466031939Erwinia tasmaniensis, complete genome1e-54222BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-54220BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome1e-51212BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome1e-51212BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome1e-51212BLASTN svgBLASTP svg
NC_020181:527592*52759257518147590Enterobacter aerogenes EA1509E, complete genome2e-50208BLASTN svgBLASTP svg
NC_010067:24881412488141251937331233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-49204BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome2e-49204BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome9e-49202BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete9e-49202BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome4e-48200BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome1e-47198BLASTN svgBLASTP svg
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome1e-47198BLASTN svgBLASTP svg
NC_010159:1710268*1710268173543325166Yersinia pestis Angola, complete genome1e-47198BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome6e-47196BLASTN svgBLASTP svg
NC_014837:2758239*2758239277859920361Pantoea sp. At-9b chromosome, complete genome2e-46194BLASTN svgBLASTP svg
NC_004631:948054*94805498991041857Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-46194BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome9e-46192BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome9e-46192BLASTN svgBLASTP svg
NC_010102:997417*997417101802320607Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-46192BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-46192BLASTN svgBLASTP svg
NC_020211:3398281*3398281342338225102Serratia marcescens WW4, complete genome4e-45190BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome1e-44188BLASTN svgBLASTP svg
NC_004547:1873390*1873390193737663987Erwinia carotovora subsp. atroseptica SCRI1043, complete genome6e-44186BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome6e-44186BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome6e-44186BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome6e-44186BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome6e-44186BLASTN svgBLASTP svg
NC_015566:3417951*3417951345859940649Serratia sp. AS12 chromosome, complete genome2e-43184BLASTN svgBLASTP svg
NC_014500:1646854*1646854167518028327Dickeya dadantii 3937 chromosome, complete genome2e-43184BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome2e-43184BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome9e-43182BLASTN svgBLASTP svg
NC_007613:15330241533024155939726374Shigella boydii Sb227, complete genome3e-42180BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome1e-41178BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome1e-41178BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome1e-41178BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome1e-41178BLASTN svgBLASTP svg
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome1e-41178BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome1e-41178BLASTN svgBLASTP svg
NC_015224:1914833*1914833193998525153Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-41176BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome2e-40174BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome2e-40174BLASTN svgBLASTP svg
NC_012912:2901021*2901021292518824168Dickeya zeae Ech1591, complete genome2e-40174BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome2e-40174BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome2e-40174BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome1e-38168BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome1e-38168BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome1e-38168BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome1e-38168BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-36161BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome1e-35159BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome3e-27131BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome1e-26129BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome1e-26129BLASTN svgBLASTP svg
NC_013716:357928*35792840652048593Citrobacter rodentium ICC168, complete genome4e-26127BLASTN svgBLASTP svg
NC_013716:50202045020204504905228849Citrobacter rodentium ICC168, complete genome3e-24121BLASTN svgBLASTP svg
NC_011149:20403962040396206929628901Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-24121BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome3e-24121BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-23117BLASTN svgBLASTP svg
NC_009786:43331433316409920769Escherichia coli E24377A plasmid pETEC_80, complete sequence3e-21111BLASTN svgBLASTP svg
NC_004337:24784612478461250482826368Shigella flexneri 2a str. 301, complete genome3e-21111BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome4e-20107BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome4e-20107BLASTN svgBLASTP svg
NC_010067:51000510007450923510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-19103BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_011184:2421687*2421687244877527089Vibrio fischeri MJ11 chromosome I, complete sequence4e-1797.6BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010939:1986263*1986263202856742305Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete9e-1279.8BLASTN svgBLASTP svg
NC_009053:1942973*1942973197934536373Actinobacillus pleuropneumoniae L20, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-0971.9BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014800:32986132986135277422914Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete2e-0971.9BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008739:41793417936534823556Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequence1e-0765.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014394:707305*70730573388526581Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020181:42194142194144800526065Enterobacter aerogenes EA1509E, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005126:34853303485330350809922770Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012880:1711062*1711062173095119890Dickeya dadantii Ech703, complete genome9e-0660BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome9e-0660BLASTN svgBLASTP svg