Pre_GI: BLASTN Hits

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Query: NC_021182:3347076 Clostridium pasteurianum BC1, complete genome

Start: 3347076, End: 3373131, Length: 26056

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:554000*55400058588731888Clostridium pasteurianum BC1, complete genome01320BLASTN svgBLASTP svg
NC_021182:25360002536000256049224493Clostridium pasteurianum BC1, complete genome01320BLASTN svgBLASTP svg
NC_021182:4367736*4367736439082723092Clostridium pasteurianum BC1, complete genome01142BLASTN svgBLASTP svg
NC_010516:23282882328288235225123964Clostridium botulinum B1 str. Okra, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021182:33842833842836240623979Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg