Pre_GI: BLASTN Hits

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Query: NC_021182:2160580 Clostridium pasteurianum BC1, complete genome

Start: 2160580, End: 2185599, Length: 25020

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015687:13773671377367140027722911Clostridium acetobutylicum DSM 1731 chromosome, complete genome5e-79303BLASTN svgBLASTP svg
NC_003030:13757641375764139779422031Clostridium acetobutylicum ATCC 824, complete genome5e-79303BLASTN svgBLASTP svg
NC_012563:3416509*3416509343524718739Clostridium botulinum A2 str. Kyoto, complete genome2e-62248BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome6e-60240BLASTN svgBLASTP svg
NC_014328:794000*79400081614922150Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_016012:396910*39691041471617807Candidatus Arthromitus sp. SFB-rat-Yit, complete genome9e-19103BLASTN svgBLASTP svg
NC_020291:57520995752099577709925001Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-1797.6BLASTN svgBLASTP svg
NC_018664:20148720148722329221806Clostridium acidurici 9a chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020291:57789995778999580315424156Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009850:1601982*1601982162099819017Arcobacter butzleri RM4018, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013316:11861561186156120513718982Clostridium difficile R20291, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009089:13298261329826135215322328Clostridium difficile 630, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011661:1411383*1411383143358622204Dictyoglomus turgidum DSM 6724, complete genome5e-0867.9BLASTN svgBLASTP svg