Pre_GI: BLASTN Hits

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Query: NC_020134:205000 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 205000, End: 224586, Length: 19587

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020134:1173000*1173000119554722548Clostridium stercorarium subsp. stercorarium DSM 8532, complete02708BLASTN svgBLASTP svg
NC_009012:3204696*3204696322373319038Clostridium thermocellum ATCC 27405, complete genome02224BLASTN svgBLASTP svg
NC_003869:2143892*2143892219937255481Thermoanaerobacter tengcongensis MB4, complete genome01066BLASTN svgBLASTP svg
NC_015555:49842*498429077940938Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete9e-40172BLASTN svgBLASTP svg
NC_019970:35985359857648740503Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-39170BLASTN svgBLASTP svg
NC_014209:81643*8164312009938457Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,5e-29137BLASTN svgBLASTP svg
NC_012034:2555447*2555447258759932153Anaerocellum thermophilum DSM 6725, complete genome3e-27131BLASTN svgBLASTP svg
NC_014721:2135500*2135500219587560376Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete3e-27131BLASTN svgBLASTP svg
NC_013921:36000*360005820522206Thermoanaerobacter italicus Ab9 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_014209:1392115*1392115141109918985Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,5e-23117BLASTN svgBLASTP svg
NC_003869:45560*455606745221893Thermoanaerobacter tengcongensis MB4, complete genome5e-23117BLASTN svgBLASTP svg
NC_014538:33718*337185528221565Thermoanaerobacter sp. X513 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_015958:677500*67750069545217953Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_015388:719669*71966974287923211Desulfobacca acetoxidans DSM 11109 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_000919:12545*125453292820384Treponema pallidum subsp. pallidum str. Nichols, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010741:12542*125423292520384Treponema pallidum subsp. pallidum SS14, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008262:419726*41972644060220877Clostridium perfringens SM101, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008262:297960*29796032314425185Clostridium perfringens SM101, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008262:2598920*2598920264903950120Clostridium perfringens SM101, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018643:641360*64136066431322954Alpha proteobacterium HIMB5 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013209:2032500*2032500205574623247Acetobacter pasteurianus IFO 3283-01, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013730:3208571*3208571324592137351Spirosoma linguale DSM 74, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015850:73668073668075815321474Acidithiobacillus caldus SM-1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020304:1222000*1222000125033028331Desulfocapsa sulfexigens DSM 10523, complete genome9e-0660BLASTN svgBLASTP svg
NC_014011:1264165*1264165129026726103Aminobacterium colombiense DSM 12261 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_010814:3332088*3332088335178319696Geobacter lovleyi SZ, complete genome9e-0660BLASTN svgBLASTP svg
NC_008262:38132338132340409922777Clostridium perfringens SM101, complete genome9e-0660BLASTN svgBLASTP svg