Query: NC_020134:205000 Clostridium stercorarium subsp. stercorarium DSM 8532, complete
Start: 205000, End: 224586, Length: 19587
Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_020134:1173000* | 1173000 | 1195547 | 22548 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 0 | 2708 | BLASTN svg | BLASTP svg |
NC_009012:3204696* | 3204696 | 3223733 | 19038 | Clostridium thermocellum ATCC 27405, complete genome | 0 | 2224 | BLASTN svg | BLASTP svg |
NC_003869:2143892* | 2143892 | 2199372 | 55481 | Thermoanaerobacter tengcongensis MB4, complete genome | 0 | 1066 | BLASTN svg | BLASTP svg |
NC_015555:49842* | 49842 | 90779 | 40938 | Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete | 9e-40 | 172 | BLASTN svg | BLASTP svg |
NC_019970:35985 | 35985 | 76487 | 40503 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 3e-39 | 170 | BLASTN svg | BLASTP svg |
NC_014209:81643* | 81643 | 120099 | 38457 | Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome, | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_012034:2555447* | 2555447 | 2587599 | 32153 | Anaerocellum thermophilum DSM 6725, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_014721:2135500* | 2135500 | 2195875 | 60376 | Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_013921:36000* | 36000 | 58205 | 22206 | Thermoanaerobacter italicus Ab9 chromosome, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_014209:1392115* | 1392115 | 1411099 | 18985 | Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome, | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_003869:45560* | 45560 | 67452 | 21893 | Thermoanaerobacter tengcongensis MB4, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_014538:33718* | 33718 | 55282 | 21565 | Thermoanaerobacter sp. X513 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015958:677500* | 677500 | 695452 | 17953 | Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_015388:719669* | 719669 | 742879 | 23211 | Desulfobacca acetoxidans DSM 11109 chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_000919:12545* | 12545 | 32928 | 20384 | Treponema pallidum subsp. pallidum str. Nichols, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010741:12542* | 12542 | 32925 | 20384 | Treponema pallidum subsp. pallidum SS14, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008262:419726* | 419726 | 440602 | 20877 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008262:297960* | 297960 | 323144 | 25185 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008262:2649289* | 2649289 | 2704676 | 55388 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008262:2598920* | 2598920 | 2649039 | 50120 | Clostridium perfringens SM101, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018643:641360* | 641360 | 664313 | 22954 | Alpha proteobacterium HIMB5 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013209:2032500* | 2032500 | 2055746 | 23247 | Acetobacter pasteurianus IFO 3283-01, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013730:3208571* | 3208571 | 3245921 | 37351 | Spirosoma linguale DSM 74, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015850:736680 | 736680 | 758153 | 21474 | Acidithiobacillus caldus SM-1 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012880:2871480* | 2871480 | 2897001 | 25522 | Dickeya dadantii Ech703, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_020304:1222000* | 1222000 | 1250330 | 28331 | Desulfocapsa sulfexigens DSM 10523, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014011:1264165* | 1264165 | 1290267 | 26103 | Aminobacterium colombiense DSM 12261 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010814:3332088* | 3332088 | 3351783 | 19696 | Geobacter lovleyi SZ, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008262:381323 | 381323 | 404099 | 22777 | Clostridium perfringens SM101, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |