Pre_GI: BLASTN Hits

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Query: NC_017249:9155500 Bradyrhizobium japonicum USDA 6, complete genome

Start: 9155500, End: 9173099, Length: 17600

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome031250BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01635BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01633BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01624BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome01600BLASTN svgBLASTP svg
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome2e-59238BLASTN svgBLASTP svg
NC_000914:13553413553415858523052Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence2e-52214BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome8e-43182BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome7e-34153BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome7e-28133BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome8e-0969.9BLASTN svgBLASTP svg