Pre_GI: BLASTN Hits

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Query: NC_017249:60216 Bradyrhizobium japonicum USDA 6, complete genome

Start: 60216, End: 81326, Length: 21111

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:60225602258376823544Bradyrhizobium japonicum USDA 110, complete genome020820BLASTN svgBLASTP svg
NC_009720:3281000*3281000330704926050Xanthobacter autotrophicus Py2, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014217:29874502987450301014422695Starkeya novella DSM 506 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg