Pre_GI: BLASTN Hits

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Query: NC_017249:3406570 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3406570, End: 3426395, Length: 19826

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:60225602258376823544Bradyrhizobium japonicum USDA 110, complete genome02242BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_016002:2825017*2825017284854323527Pseudogulbenkiania sp. NH8B, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014006:850763*85076390963758875Sphingobium japonicum UT26S chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002947:2809591*2809591283264923059Pseudomonas putida KT2440, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007508:57000057000058799217993Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011901:2914000*2914000293681522816Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-0660BLASTN svgBLASTP svg