Query: NC_017219:51563 Bifidobacterium longum subsp. infantis ATCC 15697, complete genome
Start: 51563, End: 71177, Length: 19615
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015067:32500 | 32500 | 57099 | 24600 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 0 | 11330 | BLASTN svg | BLASTP svg |
NC_008618:10915* | 10915 | 35645 | 24731 | Bifidobacterium adolescentis ATCC 15703, complete genome | 0 | 4333 | BLASTN svg | BLASTP svg |
NC_013714:2477638 | 2477638 | 2502768 | 25131 | Bifidobacterium dentium Bd1, complete genome | 3e-138 | 500 | BLASTN svg | BLASTP svg |
NC_008618:1729739 | 1729739 | 1760708 | 30970 | Bifidobacterium adolescentis ATCC 15703, complete genome | 8e-37 | 163 | BLASTN svg | BLASTP svg |
NC_010407:2038499 | 2038499 | 2056747 | 18249 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_015067:998500 | 998500 | 1020627 | 22128 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014837:2354241 | 2354241 | 2381317 | 27077 | Pantoea sp. At-9b chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_010465:62348* | 62348 | 108099 | 45752 | Yersinia pseudotuberculosis YPIII, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013406:3874157 | 3874157 | 3895656 | 21500 | Paenibacillus sp. Y412MC10 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009832:1664238 | 1664238 | 1696232 | 31995 | Serratia proteamaculans 568, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010508:1206498* | 1206498 | 1224985 | 18488 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010087:460591 | 460591 | 490737 | 30147 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010087:319063 | 319063 | 367599 | 48537 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_020064:1501441 | 1501441 | 1519843 | 18403 | Serratia marcescens FGI94, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015052:471944 | 471944 | 507366 | 35423 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010801:550270 | 550270 | 596634 | 46365 | Burkholderia multivorans ATCC 17616 chromosome 3, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013850:2103469* | 2103469 | 2146968 | 43500 | Klebsiella variicola At-22 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012559:1064821 | 1064821 | 1093674 | 28854 | Laribacter hongkongensis HLHK9, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010681:1202929 | 1202929 | 1226526 | 23598 | Burkholderia phytofirmans PsJN chromosome 1, complete sequence | 9e-06 | 60 | BLASTN svg | BLASTP svg |