Pre_GI: BLASTN Hits

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Query: NC_017218:1166844 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1166844, End: 1188967, Length: 22124

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome2e-50208BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome2e-50208BLASTN svgBLASTP svg
NC_004307:1701071*1701071172571824648Bifidobacterium longum NCC2705, complete genome2e-50208BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome4e-48200BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome6e-35157BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome5e-29137BLASTN svgBLASTP svg
NC_010617:77491477491482823353320Kocuria rhizophila DC2201, complete genome9e-28133BLASTN svgBLASTP svg
NC_014215:18410641841064186318122118Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-23119BLASTN svgBLASTP svg
NC_020302:10741201074120109337319254Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-22115BLASTN svgBLASTP svg
NC_008618:17044621704462172309918638Bifidobacterium adolescentis ATCC 15703, complete genome8e-22113BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_013521:29245402924540295147426935Sanguibacter keddieii DSM 10542, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_001263:13786051378605140253323929Deinococcus radiodurans R1 chromosome 1, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015161:758929*75892978593127003Deinococcus proteolyticus MRP chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014323:46656104665610471710351494Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014391:60008346000834602389723064Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014218:16199821619982164236022379Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006677:1255079*1255079128032225244Gluconobacter oxydans 621H, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012704:69637469637471709920726Corynebacterium kroppenstedtii DSM 44385, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013729:59820005982000600426322264Kribbella flavida DSM 17836, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008699:11327901132790117213739348Nocardioides sp. JS614, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007494:86790186790189976631866Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011958:92378992378995236428576Rhodobacter sphaeroides KD131 chromosome 2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012856:29319952931995295427722283Ralstonia pickettii 12D chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021064:17059611705961172851422554Propionibacterium avidum 44067, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015067:45962645962649282633201Bifidobacterium longum subsp. longum JCM 1217, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007643:4294818*4294818431506320246Rhodospirillum rubrum ATCC 11170, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015125:32840953284095330809924005Microbacterium testaceum StLB037, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010725:2589014*2589014261596126948Methylobacterium populi BJ001, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0661.9BLASTN svgBLASTP svg