Pre_GI: BLASTN Hits

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Query: NC_016844:107382 Treponema pallidum subsp. pallidum DAL-1 chromosome, complete

Start: 107382, End: 130887, Length: 23506

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010741:107370*10737013087523506Treponema pallidum subsp. pallidum SS14, complete genome045630BLASTN svgBLASTP svg
NC_000919:107373*10737313087823506Treponema pallidum subsp. pallidum str. Nichols, complete genome045630BLASTN svgBLASTP svg