Pre_GI: BLASTN Hits

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Query: NC_016843:950000 Treponema pallidum subsp. pertenue str. Gauthier chromosome,

Start: 950000, End: 968030, Length: 18031

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Brazzaville, the Republic of Congo in 1960. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010741:949732*94973297174222011Treponema pallidum subsp. pallidum SS14, complete genome023300BLASTN svgBLASTP svg
NC_000919:948287*94828797029722011Treponema pallidum subsp. pallidum str. Nichols, complete genome023280BLASTN svgBLASTP svg
NC_015714:943178*94317896120118024Treponema paraluiscuniculi Cuniculi A chromosome, complete genome022900BLASTN svgBLASTP svg