Query: NC_016445:89500 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete
Start: 89500, End: 121581, Length: 32082
Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria
General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011138:3182807* | 3182807 | 3211655 | 28849 | Alteromonas macleodii 'Deep ecotype', complete genome | 0 | 6181 | BLASTN svg | BLASTP svg |
NC_010554:2646806 | 2646806 | 2726511 | 79706 | Proteus mirabilis HI4320, complete genome | 0 | 5947 | BLASTN svg | BLASTP svg |
NC_018679:2412000 | 2412000 | 2434722 | 22723 | Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete | 0 | 5779 | BLASTN svg | BLASTP svg |
NC_008345:4107847 | 4107847 | 4137958 | 30112 | Shewanella frigidimarina NCIMB 400, complete genome | 0 | 5620 | BLASTN svg | BLASTP svg |
NC_003384:157158 | 157158 | 184438 | 27281 | Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid | 0 | 5523 | BLASTN svg | BLASTP svg |
NC_004741:2593012 | 2593012 | 2615576 | 22565 | Shigella flexneri 2a str. 2457T, complete genome | 0 | 3663 | BLASTN svg | BLASTP svg |
NC_010545:1781393* | 1781393 | 1807973 | 26581 | Corynebacterium urealyticum DSM 7109, complete genome | 0 | 3424 | BLASTN svg | BLASTP svg |
NC_009651:19909 | 19909 | 43328 | 23420 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5, | 0 | 3198 | BLASTN svg | BLASTP svg |
NC_010410:3606826 | 3606826 | 3695409 | 88584 | Acinetobacter baumannii AYE, complete genome | 0 | 3116 | BLASTN svg | BLASTP svg |
NC_011751:4992500 | 4992500 | 5013387 | 20888 | Escherichia coli UMN026 chromosome, complete genome | 0 | 769 | BLASTN svg | BLASTP svg |
NC_008322:2077628* | 2077628 | 2116772 | 39145 | Shewanella sp. MR-7, complete genome | 9e-152 | 545 | BLASTN svg | BLASTP svg |
NC_006512:1722138* | 1722138 | 1746724 | 24587 | Idiomarina loihiensis L2TR, complete genome | 6e-42 | 180 | BLASTN svg | BLASTP svg |
NC_004347:718091 | 718091 | 757399 | 39309 | Shewanella oneidensis MR-1, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
NC_007005:3199820 | 3199820 | 3239802 | 39983 | Pseudomonas syringae pv. syringae B728a, complete genome | 9e-35 | 157 | BLASTN svg | BLASTP svg |
NC_011386:3723019* | 3723019 | 3748999 | 25981 | Oligotropha carboxidovorans OM5, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_007925:3933765 | 3933765 | 3955247 | 21483 | Rhodopseudomonas palustris BisB18, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_009140:121107* | 121107 | 144592 | 23486 | Salmonella enterica enterica sv Newport str. SL254, complete | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008346:1117802 | 1117802 | 1137082 | 19281 | Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009349:78000* | 78000 | 101716 | 23717 | Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_011992:3375929 | 3375929 | 3417167 | 41239 | Acidovorax ebreus TPSY, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_011992:3550566 | 3550566 | 3570561 | 19996 | Acidovorax ebreus TPSY, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014394:1325616 | 1325616 | 1346342 | 20727 | Gallionella capsiferriformans ES-2 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014500:842493 | 842493 | 880596 | 38104 | Dickeya dadantii 3937 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004431:324000 | 324000 | 345804 | 21805 | Escherichia coli CFT073, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |