Pre_GI: BLASTN Hits

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Query: NC_016445:89500 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 89500, End: 121581, Length: 32082

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome06181BLASTN svgBLASTP svg
NC_010554:26468062646806272651179706Proteus mirabilis HI4320, complete genome05947BLASTN svgBLASTP svg
NC_018679:24120002412000243472222723Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete05779BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome05620BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid05523BLASTN svgBLASTP svg
NC_004741:25930122593012261557622565Shigella flexneri 2a str. 2457T, complete genome03663BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome03424BLASTN svgBLASTP svg
NC_009651:19909199094332823420Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,03198BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome03116BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome0769BLASTN svgBLASTP svg
NC_008322:2077628*2077628211677239145Shewanella sp. MR-7, complete genome9e-152545BLASTN svgBLASTP svg
NC_006512:1722138*1722138174672424587Idiomarina loihiensis L2TR, complete genome6e-42180BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome1e-36163BLASTN svgBLASTP svg
NC_007005:31998203199820323980239983Pseudomonas syringae pv. syringae B728a, complete genome9e-35157BLASTN svgBLASTP svg
NC_011386:3723019*3723019374899925981Oligotropha carboxidovorans OM5, complete genome1e-24123BLASTN svgBLASTP svg
NC_007925:39337653933765395524721483Rhodopseudomonas palustris BisB18, complete genome1e-21113BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete2e-0869.9BLASTN svgBLASTP svg
NC_008346:11178021117802113708219281Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete2e-0869.9BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete1e-0663.9BLASTN svgBLASTP svg
NC_011992:33759293375929341716741239Acidovorax ebreus TPSY, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011992:35505663550566357056119996Acidovorax ebreus TPSY, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014394:13256161325616134634220727Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014500:84249384249388059638104Dickeya dadantii 3937 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome4e-0661.9BLASTN svgBLASTP svg