Pre_GI: BLASTN Hits

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Query: NC_016445:2938887 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2938887, End: 2975696, Length: 36810

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete016270BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02418BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete02415BLASTN svgBLASTP svg
NC_002505:19317501931750195259920850Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete02415BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete02343BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence01978BLASTN svgBLASTP svg
NC_014837:3739408*3739408376471125304Pantoea sp. At-9b chromosome, complete genome4e-145523BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-145523BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-138500BLASTN svgBLASTP svg
NC_009831:1255995*1255995127895522961Shewanella sediminis HAW-EB3, complete genome4e-136494BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome2e-128468BLASTN svgBLASTP svg
NC_004578:568236*56823659272224487Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-90341BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome8e-88333BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete7e-76293BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-74287BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome4e-71278BLASTN svgBLASTP svg
NC_009053:1668500*1668500169468326184Actinobacillus pleuropneumoniae L20, complete genome4e-71278BLASTN svgBLASTP svg
NC_013421:29722692972269300638334115Pectobacterium wasabiae WPP163, complete genome2e-69272BLASTN svgBLASTP svg
NC_007912:909112*90911293451825407Saccharophagus degradans 2-40, complete genome2e-63252BLASTN svgBLASTP svg
NC_011566:47096724709672473260322932Shewanella piezotolerans WP3, complete genome8e-60240BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome1e-58236BLASTN svgBLASTP svg
NC_012917:27862832786283280578619504Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-55226BLASTN svgBLASTP svg
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-54222BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome8e-51210BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome1e-49206BLASTN svgBLASTP svg
NC_008463:632869*63286965598423116Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-46196BLASTN svgBLASTP svg
NC_012968:2228943*2228943225222323281Methylotenera mobilis JLW8, complete genome3e-44188BLASTN svgBLASTP svg
NC_009434:796878*79687882874331866Pseudomonas stutzeri A1501, complete genome1e-43186BLASTN svgBLASTP svg
NC_015856:1182974*1182974120901726044Collimonas fungivorans Ter331 chromosome, complete genome1e-37167BLASTN svgBLASTP svg
NC_009727:357206*35720637934622141Coxiella burnetii Dugway 7E9-12, complete genome1e-37167BLASTN svgBLASTP svg
NC_002971:1523065*1523065154336920305Coxiella burnetii RSA 493, complete genome1e-37167BLASTN svgBLASTP svg
NC_007947:2447635*2447635249025042616Methylobacillus flagellatus KT, complete genome2e-35159BLASTN svgBLASTP svg
NC_014323:961825*96182598122819404Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-34155BLASTN svgBLASTP svg
NC_008260:2340824*2340824238894248119Alcanivorax borkumensis SK2, complete genome2e-33153BLASTN svgBLASTP svg
NC_003902:4430621*4430621444960618986Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-33151BLASTN svgBLASTP svg
NC_007086:4489153*4489153450718918037Xanthomonas campestris pv. campestris str. 8004, complete genome6e-33151BLASTN svgBLASTP svg
NC_010552:752007*75200777809926093Burkholderia ambifaria MC40-6 chromosome 2, complete sequence9e-32147BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence9e-32147BLASTN svgBLASTP svg
NC_011071:4000620*4000620403191731298Stenotrophomonas maltophilia R551-3, complete genome9e-29137BLASTN svgBLASTP svg
NC_009465:90000*9000013018540186Candidatus Vesicomyosocius okutanii HA, complete genome1e-27133BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-26129BLASTN svgBLASTP svg
NC_015947:3991696*3991696401521623521Burkholderia sp. JV3 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_009952:2381601*2381601241824736647Dinoroseobacter shibae DFL 12, complete genome9e-26127BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-24123BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-24123BLASTN svgBLASTP svg
NC_007435:1077792*1077792110044222651Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-22115BLASTN svgBLASTP svg
NC_009078:2351046*2351046237054119496Burkholderia pseudomallei 1106a chromosome II, complete sequence8e-20107BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence8e-20107BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-19105BLASTN svgBLASTP svg
NC_015713:2453409*2453409249799944591Simkania negevensis Z chromosome gsn.131, complete genome1e-18103BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete5e-1591.7BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence5e-1591.7BLASTN svgBLASTP svg
NC_009052:50899635089963511024820286Shewanella baltica OS155, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014733:2363838*2363838239108027243Methylovorus sp. MP688 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome8e-1487.7BLASTN svgBLASTP svg
CU928145:2973968*2973968299959925632Escherichia coli 55989 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_004741:2741971*2741971276422322253Shigella flexneri 2a str. 2457T, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_008258:2905413*2905413292427518863Shigella flexneri 5 str. 8401, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009800:2788164*2788164280740719244Escherichia coli HS, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009801:2898426*2898426294876250337Escherichia coli E24377A, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_010468:1130000*1130000115350023501Escherichia coli ATCC 8739, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_011748:2973968*2973968299959925632Escherichia coli 55989, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_012969:2476318*2476318252045544138Methylovorus glucosetrophus SIP3-4 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_005139:2201820*2201820227810176282Vibrio vulnificus YJ016 chromosome I, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_012721:1986436*1986436201260326168Burkholderia glumae BGR1 chromosome 2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-1281.8BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014306:31020003102000312424122242Erwinia billingiae Eb661, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence5e-1281.8BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_010498:2847359*2847359287165924301Escherichia coli SMS-3-5, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence7e-1177.8BLASTN svgBLASTP svg
NC_006155:40620004062000408523223233Yersinia pseudotuberculosis IP 32953, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010498:41669034166903419347126569Escherichia coli SMS-3-5, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011750:44905734490573451714226570Escherichia coli IAI39 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007614:2764848*2764848279529030443Nitrosospira multiformis ATCC 25196 chromosome 1, complete4e-0971.9BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete3e-0765.9BLASTN svgBLASTP svg
NC_011751:3048490*3048490309200343514Escherichia coli UMN026 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014306:64215264215266635524204Erwinia billingiae Eb661, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015687:1037706*1037706106791230207Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004459:1794540*1794540182011925580Vibrio vulnificus CMCP6 chromosome I, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_003030:1037885*1037885106609928215Clostridium acetobutylicum ATCC 824, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_013592:32630053263005329243329429Dickeya dadantii Ech586, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014623:7331860*7331860735320421345Stigmatella aurantiaca DW4/3-1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015565:28790028790033409146192Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_009850:1011293*1011293103921027918Arcobacter butzleri RM4018, complete genome4e-0661.9BLASTN svgBLASTP svg