Pre_GI: BLASTN Hits

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Query: NC_015957:5136500 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5136500, End: 5154228, Length: 17729

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-80307BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-52212BLASTN svgBLASTP svg
NC_010572:113201832018Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-52212BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome8e-37163BLASTN svgBLASTP svg
NC_013595:4031947*4031947406329831352Streptosporangium roseum DSM 43021, complete genome1e-32149BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome7e-25123BLASTN svgBLASTP svg
NC_003888:7028165*7028165706572937565Streptomyces coelicolor A3(2), complete genome4e-23117BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1695.6BLASTN svgBLASTP svg
NC_013595:52822075282207531442932223Streptosporangium roseum DSM 43021, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_013595:3541012*3541012356209921088Streptosporangium roseum DSM 43021, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_013595:73028887302888732647023583Streptosporangium roseum DSM 43021, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013595:5176000*5176000519869322694Streptosporangium roseum DSM 43021, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_021177:23096152309615233757227958Streptomyces fulvissimus DSM 40593, complete genome8e-0660BLASTN svgBLASTP svg
NC_015951:46000460007890132902Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete8e-0660BLASTN svgBLASTP svg