Pre_GI: BLASTN Hits

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Query: NC_015957:2781740 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 2781740, End: 2809436, Length: 27697

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome01185BLASTN svgBLASTP svg
NC_009142:55795635579563561009730535Saccharopolyspora erythraea NRRL 2338, complete genome3e-22115BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_009439:1075170*1075170109793122762Pseudomonas mendocina ymp, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015434:16715321671532169059919068Verrucosispora maris AB-18-032 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome1e-0869.9BLASTN svgBLASTP svg