Pre_GI: BLASTN Hits

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Query: NC_015957:2726816 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 2726816, End: 2751236, Length: 24421

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome2e-177630BLASTN svgBLASTP svg
NC_018524:2338000*2338000236306925070Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_010407:11144081114408113894624539Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_003155:30951233095123312200426882Streptomyces avermitilis MA-4680, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015953:57771165777116583193254817Streptomyces sp. SirexAA-E chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018524:17459491745949178032034372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg