Query: NC_015957:1968587 Streptomyces violaceusniger Tu 4113 chromosome, complete genome
Start: 1968587, End: 2006874, Length: 38288
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_003155:3095123 | 3095123 | 3122004 | 26882 | Streptomyces avermitilis MA-4680, complete genome | 7e-147 | 529 | BLASTN svg | BLASTP svg |
NC_015953:1860946 | 1860946 | 1879269 | 18324 | Streptomyces sp. SirexAA-E chromosome, complete genome | 3e-115 | 424 | BLASTN svg | BLASTP svg |
NC_018750:5828000* | 5828000 | 5850277 | 22278 | Streptomyces venezuelae ATCC 10712, complete genome | 2e-76 | 295 | BLASTN svg | BLASTP svg |
NC_003155:622993 | 622993 | 654326 | 31334 | Streptomyces avermitilis MA-4680, complete genome | 4e-74 | 287 | BLASTN svg | BLASTP svg |
NC_003888:6233478 | 6233478 | 6253335 | 19858 | Streptomyces coelicolor A3(2), complete genome | 7e-39 | 170 | BLASTN svg | BLASTP svg |
NC_013510:675368 | 675368 | 699746 | 24379 | Thermomonospora curvata DSM 43183, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_014210:1471752 | 1471752 | 1534346 | 62595 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_018524:2338000* | 2338000 | 2363069 | 25070 | Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_018750:3481476* | 3481476 | 3513799 | 32324 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_015953:5777116 | 5777116 | 5831932 | 54817 | Streptomyces sp. SirexAA-E chromosome, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009921:4035225* | 4035225 | 4073876 | 38652 | Frankia sp. EAN1pec, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013159:403918* | 403918 | 429321 | 25404 | Saccharomonospora viridis DSM 43017, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_015953:2512152 | 2512152 | 2536762 | 24611 | Streptomyces sp. SirexAA-E chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013093:1909305* | 1909305 | 1937168 | 27864 | Actinosynnema mirum DSM 43827, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |