Pre_GI: BLASTN Hits

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Query: NC_015957:1968587 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 1968587, End: 2006874, Length: 38288

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:30951233095123312200426882Streptomyces avermitilis MA-4680, complete genome7e-147529BLASTN svgBLASTP svg
NC_015953:18609461860946187926918324Streptomyces sp. SirexAA-E chromosome, complete genome3e-115424BLASTN svgBLASTP svg
NC_018750:5828000*5828000585027722278Streptomyces venezuelae ATCC 10712, complete genome2e-76295BLASTN svgBLASTP svg
NC_003155:62299362299365432631334Streptomyces avermitilis MA-4680, complete genome4e-74287BLASTN svgBLASTP svg
NC_003888:62334786233478625333519858Streptomyces coelicolor A3(2), complete genome7e-39170BLASTN svgBLASTP svg
NC_013510:67536867536869974624379Thermomonospora curvata DSM 43183, complete genome1e-24123BLASTN svgBLASTP svg
NC_014210:14717521471752153434662595Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-1385.7BLASTN svgBLASTP svg
NC_018524:2338000*2338000236306925070Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_018750:3481476*3481476351379932324Streptomyces venezuelae ATCC 10712, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015953:57771165777116583193254817Streptomyces sp. SirexAA-E chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_013159:403918*40391842932125404Saccharomonospora viridis DSM 43017, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome2e-0869.9BLASTN svgBLASTP svg