Pre_GI: BLASTN Hits

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Query: NC_014328:2588994 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 2588994, End: 2606993, Length: 18000

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014328:52204552204554516023116Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-93349BLASTN svgBLASTP svg
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome5e-69270BLASTN svgBLASTP svg
NC_015687:27964127964130219622556Clostridium acetobutylicum DSM 1731 chromosome, complete genome6e-59236BLASTN svgBLASTP svg
NC_003030:27964327964330219822556Clostridium acetobutylicum ATCC 824, complete genome6e-59236BLASTN svgBLASTP svg
NC_021182:34386013438601346026021660Clostridium pasteurianum BC1, complete genome4e-57230BLASTN svgBLASTP svg
NC_010723:485874*48587450809922226Clostridium botulinum E3 str. Alaska E43, complete genome2e-43184BLASTN svgBLASTP svg
NC_008262:2379144*2379144239845819315Clostridium perfringens SM101, complete genome2e-40174BLASTN svgBLASTP svg
NC_003366:24949072494907251858823682Clostridium perfringens str. 13, complete genome8e-34153BLASTN svgBLASTP svg
NC_008261:2708929*2708929273260323675Clostridium perfringens ATCC 13124, complete genome8e-34153BLASTN svgBLASTP svg
NC_020291:684500*68450070271718218Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome8e-34153BLASTN svgBLASTP svg
NC_014328:85290*8529014387558586Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_014328:3120145*3120145314410323959Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-32147BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-29137BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome2e-28135BLASTN svgBLASTP svg
NC_015275:521436*52143655362332188Clostridium lentocellum DSM 5427 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_014328:34829803482980351005727078Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome1e-23119BLASTN svgBLASTP svg
NC_014328:77309577309579175318659Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-23117BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome2e-19105BLASTN svgBLASTP svg
NC_014328:23269302326930235084023911Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-19103BLASTN svgBLASTP svg
NC_009012:19014921901492192306421573Clostridium thermocellum ATCC 27405, complete genome6e-19103BLASTN svgBLASTP svg
NC_003552:47826354782635480759924965Methanosarcina acetivorans C2A, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014328:17395781739578176272323146Clostridium ljungdahlii ATCC 49587 chromosome, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014328:711842*71184273571723876Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_021182:4829000*4829000485931530316Clostridium pasteurianum BC1, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_020389:71417871417873707322896Methanosarcina mazei Tuc01, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_013192:81585481585483809922246Leptotrichia buccalis DSM 1135, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_003454:983681*983681100260518925Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete1e-1075.8BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009975:16820001682000170429722298Methanococcus maripaludis C6, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_005791:83750583750586071523211Methanococcus maripaludis S2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015275:45776424577642459717319532Clostridium lentocellum DSM 5427 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_009922:94453894453896923624699Alkaliphilus oremlandii OhILAs, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015847:90993890993893286822931Methanococcus maripaludis XI chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015672:1566565*1566565158606819504Flexistipes sinusarabici DSM 4947 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_006833:902744*90274492610523362Wolbachia endosymbiont strain TRS of Brugia malayi, complete5e-0763.9BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome8e-0660BLASTN svgBLASTP svg
NC_011296:16362421636242165519418953Thermodesulfovibrio yellowstonii DSM 11347, complete genome8e-0660BLASTN svgBLASTP svg
NC_011565:77792977792980201724089Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,8e-0660BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome8e-0660BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome8e-0660BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome8e-0660BLASTN svgBLASTP svg
NC_010520:14279811427981145070222722Clostridium botulinum A3 str. Loch Maree, complete genome8e-0660BLASTN svgBLASTP svg